PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023554001.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

CAMTA

Protein Properties

Length: 1089aa MW: 121242 Da PI: 6.101

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023554001.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	182.5	4.8e-57	20	136	2	118
CG-1 2 lkekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqr 96 ++ k+rwl++ ei++iL n+ k+++++e+++rp+sgsl+L++rk++ryfrkDG++w+kkkdgktvrE+hekLKvg+++vl+cyYah+een++fqr XP_023554001.1 20 IEAKHRWLRPAEICEILRNYPKFQIASEPPDRPSSGSLFLFDRKVLRYFRKDGHKWRKKKDGKTVREAHEKLKVGSIDVLHCYYAHGEENENFQR 114 4569***************************************************************************************** PP CG-1 97 rcywlLeeelekivlvhylevk 118 r+yw+Lee+l +iv+vhylevk XP_023554001.1 115 RSYWMLEEHLMHIVFVHYLEVK 136 *****************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 1089 aa Download sequence
MADRGSYGLA PRLDIDQLLI EAKHRWLRPA EICEILRNYP KFQIASEPPD RPSSGSLFLF 60 DRKVLRYFRK DGHKWRKKKD GKTVREAHEK LKVGSIDVLH CYYAHGEENE NFQRRSYWML 120 EEHLMHIVFV HYLEVKGNRT NIGAVVETDE VSSSSQKSSP TSASYSSSYN QAASENADSP 180 SPTSPLTPFC EDGDTEDTGQ ATSRFRSFPT SPKMGNGLLM NKQDAGQSNF YFPHSSSNTS 240 VPAVDYVSQV QKDVLGGNIC GTNVTDSQKT LSSASWEEIL QHCTTGFQTV PSHVLSSLIE 300 PVSSGIVVGQ ENSIPGQPST SNSAITEDFG SSLTMNSNWQ VSFEDNTSSF SKEYVDQFPE 360 LYSVYDIDSR LTEQNSHNAT FGSGREMSCA HPGIENEEIL PNNLELQVKE GESYSAMRLS 420 SENDKSKEGT VGYSLSLKQS LIDGEESLKK VDSFSRWVSR ELVEVDDLHM HPSSGLSWST 480 VECGDMVDNS SLTPSLSEDQ LFSITEFSPK WTLADLETEV VIIGKFLGNN HGTKCYWSCM 540 FGEVEVPAEV LADGILCCHA PPHSVGQVPF YVTCSNRLAC SEIREFDYLA GSAQDVDVTE 600 VYTAGATEEL YLHMRLERLL SHRSSNPPNN LSEGALAKRN LIRELISIKE EEDCYGEEPN 660 SHNVQIQHQN KEFLFVKLMK EKVYSWLIRK VIEGGKGPHI LDDEGQGLIH LAAALGYDWA 720 IRPIVAAGVS INFRDVNGWT ALHWAAFCGR ELTVGTLITL NAAPGLPADP SPKNPLGISP 780 SELASMSGHK GIAGFLAESS LTSYIESISM GETVKDGVLD VSKRKPVHTI SERRATPISD 840 GFMPADLSLK DSLTAVCNAT QAAGRIHLMF RMQSFQRKKL SECSPDELGS SDDTAISFAK 900 ARARKSGLSN SPAHAAAVHI QKKFRGWRMR KEFLLIRQRI VKIQAHVRGH QVRKQYKKIV 960 WSVGILDKII LRWRRKGSGL RGFRSDAAAK NPSAVMEPPK EDDYDFLAKG RKQTEERFQK 1020 ALTRVKSMAQ YPEGRDQYRR LLTVVQKCQE TKASNMAITS TREEIIEGDD MIDIDSLLDD 1080 DALMSMTFD

Sequence ? help Back to Top

Protein Sequence Length: 1089 aa Download sequence

MADRGSYGLA PRLDIDQLLI EAKHRWLRPA EICEILRNYP KFQIASEPPD RPSSGSLFLF  60
DRKVLRYFRK DGHKWRKKKD GKTVREAHEK LKVGSIDVLH CYYAHGEENE NFQRRSYWML  120
EEHLMHIVFV HYLEVKGNRT NIGAVVETDE VSSSSQKSSP TSASYSSSYN QAASENADSP  180
SPTSPLTPFC EDGDTEDTGQ ATSRFRSFPT SPKMGNGLLM NKQDAGQSNF YFPHSSSNTS  240
VPAVDYVSQV QKDVLGGNIC GTNVTDSQKT LSSASWEEIL QHCTTGFQTV PSHVLSSLIE  300
PVSSGIVVGQ ENSIPGQPST SNSAITEDFG SSLTMNSNWQ VSFEDNTSSF SKEYVDQFPE  360
LYSVYDIDSR LTEQNSHNAT FGSGREMSCA HPGIENEEIL PNNLELQVKE GESYSAMRLS  420
SENDKSKEGT VGYSLSLKQS LIDGEESLKK VDSFSRWVSR ELVEVDDLHM HPSSGLSWST  480
VECGDMVDNS SLTPSLSEDQ LFSITEFSPK WTLADLETEV VIIGKFLGNN HGTKCYWSCM  540
FGEVEVPAEV LADGILCCHA PPHSVGQVPF YVTCSNRLAC SEIREFDYLA GSAQDVDVTE  600
VYTAGATEEL YLHMRLERLL SHRSSNPPNN LSEGALAKRN LIRELISIKE EEDCYGEEPN  660
SHNVQIQHQN KEFLFVKLMK EKVYSWLIRK VIEGGKGPHI LDDEGQGLIH LAAALGYDWA  720
IRPIVAAGVS INFRDVNGWT ALHWAAFCGR ELTVGTLITL NAAPGLPADP SPKNPLGISP  780
SELASMSGHK GIAGFLAESS LTSYIESISM GETVKDGVLD VSKRKPVHTI SERRATPISD  840
GFMPADLSLK DSLTAVCNAT QAAGRIHLMF RMQSFQRKKL SECSPDELGS SDDTAISFAK  900
ARARKSGLSN SPAHAAAVHI QKKFRGWRMR KEFLLIRQRI VKIQAHVRGH QVRKQYKKIV  960
WSVGILDKII LRWRRKGSGL RGFRSDAAAK NPSAVMEPPK EDDYDFLAKG RKQTEERFQK  1020
ALTRVKSMAQ YPEGRDQYRR LLTVVQKCQE TKASNMAITS TREEIIEGDD MIDIDSLLDD  1080
DALMSMTFD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64220.2	0.0	CAMTA family protein