PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023554284.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

MYB

Protein Properties

Length: 204aa MW: 23740.8 Da PI: 5.763

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023554284.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	58.5	1.5e-18	10	57	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd+ll ++vk +G g+W+++a ++Rt+k+c++rw +yl XP_023554284.1 10 KGPWTPEEDKLLSEYVKVHGEGRWTSVATGSRLNRTGKSCRLRWVNYL 57 79********************************************97 PP
2	Myb_DNA-binding	48.3	2.3e-15	63	107	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg T+ E+ +++++++++G++ W+tIar+++ gRt++++k++w+++ XP_023554284.1 63 RGHLTPLEEGIIIELHALWGNK-WSTIARYLP-GRTDNEIKNYWRTH 107 5677999*************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 204 aa Download sequence
MDAEEKEWRK GPWTPEEDKL LSEYVKVHGE GRWTSVATGS RLNRTGKSCR LRWVNYLRPG 60 LKRGHLTPLE EGIIIELHAL WGNKWSTIAR YLPGRTDNEI KNYWRTHFKK MKPKREAQMV 120 VPQPDNKTSP PISFEQDREE KDMMKPYERD NDELGMVFTE PAAMAADQSY LSMVYEDFAT 180 WAAAAAAEES YLWGGLWEDS NNLL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G30210.1	5e-65	MYB family protein