PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023554508.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 386aa    MW: 43297.2 Da    PI: 6.4172
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023554508.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.63.7e-19189239256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                      y+GVr+++ +g+WvAeIr p++   r+r +lg+f+tae+Aa a+++ + kl+ge
  XP_023554508.1 189 LYRGVRQRH-WGKWVAEIRLPRN---RTRLWLGTFDTAEDAAMAYDREAFKLRGE 239
                     59******9.**********955...5**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 386 aa     Download sequence    
MAEDKKTGKS KMVLDERTPQ LKFSKKKIDK GKEQWKPVLD DAFLSRRPLK KFCSSDFQNP  60
FLQSPVSVSP PSKIQFPFDF QASQQSTTTT QFISSSSSSS SSSSSHFPAF GSPEQQMISF  120
SSNQQQGIGY PPYFLGGGDP VATQQRLFKY WSDAFHLSPR GRAMMMSRMG PDGCHLFGPP  180
VQPLSATKLY RGVRQRHWGK WVAEIRLPRN RTRLWLGTFD TAEDAAMAYD REAFKLRGEN  240
ARLNFPERFL NKNNPKTEPK TEHTNPITEE AHEDSAVVLP PSEEEKPDEQ LAESGGASEA  300
PEMVWGEMEE AWFNAIPAGW GPGSAVWDHL DPTNNLVLQS QFPFGSSNQP QIKDSDDNQN  360
KVENSESASS SSSSAPMKLF LWKDQD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20880.15e-59ERF family protein