PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023554551.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 319aa    MW: 35471.4 Da    PI: 6.1299
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023554551.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.94.1e-09188230855
                     HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       r+RR+++ ++   L++llP++     kK++ a++Le+A++Y+k Lq
  XP_023554551.1 188 LARQRRQKLSDKTRCLQKLLPWD-----KKMDIATMLEEACKYVKFLQ 230
                     679*******************9.....9******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    
METSAGDDAS STVWDDACFD AMFSGVSLQS FLAGGSQSHT LLPSLFGGCY VADSLTFPDG  60
MTSLYPQVSS NFVAESTASS DGPFFKLPKS EPMSVYEQTE TQESSFLFHD STSFPHLPDL  120
RSLEQCSSSF NKRARVDSVM NPLQMVEPMV RTCEGFQNFF VPYEYKLSPD LTTSAAVSPA  180
VQIPRSALAR QRRQKLSDKT RCLQKLLPWD KKMDIATMLE EACKYVKFLQ AQLLALQSMP  240
RESAISSYSN NHYITGMFGG LERLNRNQLL QVLVNSPVAQ TMLCSQSCCV FSAEQLGLIQ  300
KIAEKRVLLQ QMSTFRPKP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22100.19e-20bHLH family protein