PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023554571.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

NAC

Protein Properties

Length: 273aa MW: 31584.1 Da PI: 7.7235

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023554571.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	149	2.3e-46	8	135	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk. 95 pGfrFhPt+eel+ +yLk+ v+gk l++ + i +++iy+++Pw+Lp ++ +e+ewyfF++rd+k g r+nr+tk+gyWkatg+d+++++ XP_023554571.1 8 LPGFRFHPTEEELLEFYLKHVVSGKGLQF-DPIGTLNIYHHDPWELPGLARIGEREWYFFVPRDRKLGGGGRPNRTTKNGYWKATGSDRKIVRLs 101 59************************9.99***********8778899*********************************9876 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++l+gl+ktLvfy+gra +g+ktdW+m+eyr+ XP_023554571.1 102 dPKQLIGLRKTLVFYSGRATRGSKTDWIMNEYRF 135 67888*************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 273 aa Download sequence
MTHQTDHLPG FRFHPTEEEL LEFYLKHVVS GKGLQFDPIG TLNIYHHDPW ELPGLARIGE 60 REWYFFVPRD RKLGGGGRPN RTTKNGYWKA TGSDRKIVRL SDPKQLIGLR KTLVFYSGRA 120 TRGSKTDWIM NEYRFPDNSP LSKDMVLCKI YRKATSLKVL EQRAAMEEED AKHFQASSSP 180 PASPFESISF CSQQEEMVPS VIPTHEVLKK ELEVAAMVAR TKEEKAVEPK FTYTPLQIPS 240 ELDKLDMDWS QDLFWSQLNS PWLQTLTPYM LNF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17040.1	1e-95	NAC family protein