PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023554605.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 231aa    MW: 24804.8 Da    PI: 8.818
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023554605.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.45e-202574255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    +++GVr ++ +gr++AeIrdp   gk+ r++lg+f+taeeAa+a++ a+++++g
  XP_023554605.1 25 HFRGVRKRP-WGRYAAEIRDP---GKKSRVWLGTFDTAEEAARAYDTAARQFRG 74
                    69*******.**********8...557************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    
MVAKEKSAAK SLPSLCNNTY AKELHFRGVR KRPWGRYAAE IRDPGKKSRV WLGTFDTAEE  60
AARAYDTAAR QFRGAKAKTN FPLEEELIDV SPQKINQSPS PSSTVESSSS SSQEKTPSPE  120
IARNYGATVG VGRTSPFLHP QFLHQVGCNV SAAAAASGGG GVRPVLLMDA FGRPEFVAHG  180
YPIRFDPATV DLTARFSGGS HSDSDSSSVV DCRPVKEILN LDLNLSPPVD A
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.11e-26ERF family protein