PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023554705.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family MYB_related
Protein Properties Length: 79aa    MW: 8908.02 Da    PI: 8.9689
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023554705.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding301.2e-091057247
                     SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47
                     g WT+   + + +a +++  +   +W  +a+ +g g+t++++k ++q +
   XP_023554705.1 10 GVWTAKQNKAFEEALAMYDQDrpdRWLNVAKAIG-GKTEEEVKRHYQVL 57
                     78******************9*************.************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 79 aa     Download sequence    
MASMSAHGSG VWTAKQNKAF EEALAMYDQD RPDRWLNVAK AIGGKTEEEV KRHYQVLVED  60
VKHIESGKVP FPYRSSRGS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39250.14e-34MYB_related family protein