PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023554794.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

Trihelix

Protein Properties

Length: 300aa MW: 34296.1 Da PI: 10.4083

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023554794.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	50.3	6.4e-16	48	138	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +Wt + + +Liea e++ +l+rg+l+ ++W+e+++++ +er+ r+++qCk++++ l+++yk +k++ ++ + +p+f+ l+ XP_023554794.1 48 CWTLDNTSTLIEAWGERHIDLNRGSLRHKHWQEIANAVnsshgHERKSIRTAIQCKNRIDTLKRKYKIEKARIQESGGSYVCAWPFFSCLD 138 7************************************99999999999*******************99998777778999999886 PP

Sequence ? help Back to Top
Protein Sequence Length: 300 aa Download sequence
MQSPSRQHPI PTPLPTLTGH TLRRQPSGLT VALMALSLPS PAPVREDCWT LDNTSTLIEA 60 WGERHIDLNR GSLRHKHWQE IANAVNSSHG HERKSIRTAI QCKNRIDTLK RKYKIEKARI 120 QESGGSYVCA WPFFSCLDDL IGNNHKASTP VAVSNCKAAP VTTPRLSLFS KVPVAPRSGT 180 KKRRSTHVYR SFRDSYFRRD VISNENEGKN SMESDNSLSS SRFKDREAGY RKLAEAIGTI 240 SDIYERVEVA KQRHMIELEM QRMQFVKDLE YQRMQLLMEM QLQIQKIKRA RRASGADCYS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G58630.1	6e-49	Trihelix family protein