PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023554809.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family WRKY
Protein Properties Length: 243aa    MW: 26969.8 Da    PI: 6.3388
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023554809.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY54.52.4e-171261652059
                     S-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY  20 fprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                       +sYYrCts++C vkk+vers +dp+vv++tYeg+Hnh+
  XP_023554809.1 126 KKQSYYRCTSQKCLVKKRVERSYQDPSVVITTYEGQHNHH 165
                     5689***********************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    
MSNEEGKNLY QPYDPFHYNQ LDMNRSIFHQ QHPPLDPALM SFTNFLDTSL DYNSLSRAFD  60
VSCSSSEVIS PVDDVSKNKA SCGGKNLNQS STTQNSSVSS SSNEAVVEED SIKSIKEDPK  120
DEEKSKKQSY YRCTSQKCLV KKRVERSYQD PSVVITTYEG QHNHHCPATL RGHSAGIMSS  180
PFYASAASTS LTAPSSGPTL PHELFSHLLP TNSRADPASG MYQNLSLQMP DHYGLLQDLF  240
TQK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29860.12e-20WRKY family protein