PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023554816.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family MYB_related
Protein Properties Length: 96aa    MW: 11147.7 Da    PI: 9.7719
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023554816.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding26.41.6e-081457344
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44
                      WT+   +l+ +a +++ ++   +W+ Ia  +g g+++ ++k ++
   XP_023554816.1 14 TWTAKQNKLFEKALALYDKEtpeRWHNIAMAVG-GKSADEVKRHY 57
                     5*****************99*************.**********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 96 aa     Download sequence    
MASSSLKQQR PEATWTAKQN KLFEKALALY DKETPERWHN IAMAVGGKSA DEVKRHYEIL  60
LEDLRRIESG RVPIPNYRGA HNGDEELRLL KYLKLQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75250.24e-36MYB_related family protein