PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023870409.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

WRKY

Protein Properties

Length: 185aa MW: 20922.6 Da PI: 9.9655

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023870409.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	103.7	9.9e-33	106	164	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK vk+s++prsYYrCt+ +C+vkk+++r ++d ++v++tYeg Hnh+ XP_023870409.1 106 LDDGYRWRKYGQKAVKNSNHPRSYYRCTQLTCNVKKQIQRLSKDSSIVVTTYEGIHNHP 164 59********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 185 aa Download sequence
MDEVPLVPLT LNNIQALTYS LPSTSLHQPG QETIDQVASD IDWVSFLSAS PFIFGNEKPS 60 STSESLTAEN GGRGENRTRN KGKASRTKKV NPSRIAFHTR SIDDILDDGY RWRKYGQKAV 120 KNSNHPRSYY RCTQLTCNVK KQIQRLSKDS SIVVTTYEGI HNHPSEKLME SLSPLLRQLQ 180 FLSRI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64000.1	3e-59	WRKY family protein