PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023870627.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

WRKY

Protein Properties

Length: 214aa MW: 24152.1 Da PI: 10.1715

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023870627.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	39.2	1.4e-12	100	122	1	23
---SS-EEEEEEE--TT-SS-EE CS WRKY 1 ldDgynWrKYGqKevkgsefprs 23 ldDgy+WrKYGqK vk+++fprs XP_023870627.1 100 LDDGYRWRKYGQKAVKNNKFPRS 122 59********************8 PP
2	WRKY	51.9	1.5e-16	153	194	18	59
-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 18 sefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ++sYYrCt++gC+vkk+v+r ++d+ +v++tYeg H h+ XP_023870627.1 153 PGSSQSYYRCTHQGCNVKKQVQRLTKDEAIVVTTYEGMHSHP 194 56789************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 214 aa Download sequence
MENYSTYFSS SSSTPPTSSL TLSMADSHAY NELQGLKSNG FLGLMSQMGV VPAVSNIDVP 60 QSRSFTVGSE TDVNSGKKKG EKKIRKPRYA FQTRSQVDIL DDGYRWRKYG QKAVKNNKFP 120 RSRTSSSSSK RIQEGMDEMV KGPRHTKCHT KRPGSSQSYY RCTHQGCNVK KQVQRLTKDE 180 AIVVTTYEGM HSHPIEKSTD NFEHILSQMQ IYTS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G13080.1	3e-51	WRKY family protein