PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023871379.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

GeBP

Protein Properties

Length: 399aa MW: 44122.8 Da PI: 4.9007

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023871379.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	119.4	2e-37	161	255	4	97
DUF573 4 qrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkk.aksgkepsfskehdqkifelskkiWg 97 +rlws+e e+++L+G+i++k+k+g +p +d+ +f+ef+kk+is++vsk+q+v+Kirr+KkK++ +v++ ++g++p+fsk+h++ +felskkiWg XP_023871379.1 161 SRLWSDENELAVLKGMIEYKSKKGLDPISDMGDFHEFIKKNISVEVSKNQVVDKIRRMKKKYQVNVERaGDNGENPVFSKPHEHRCFELSKKIWG 255 79***************************************************************9889*********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 399 aa Download sequence
MAPKRLKEDP PPAATSSGEE EEDSENDAAS DEEEHEVSNA VQEKEKSDDE EEDEDDDDEE 60 SPAGKLTVIP SSNKGSDNES GSGSDSESES DSFNDKSSPP SPSLSAYTIK PIASKPMEPK 120 KSSAATAAKP INSKKRKVVA SSSAITNGDD EDSKKHTGGV SRLWSDENEL AVLKGMIEYK 180 SKKGLDPISD MGDFHEFIKK NISVEVSKNQ VVDKIRRMKK KYQVNVERAG DNGENPVFSK 240 PHEHRCFELS KKIWGIEAGS TRKAKPPTRG IANNNINSNN NSIAIALPAR KKEKEKEKDK 300 EKEKEACLDN GEVKDEKEEE FVASYPCLNS VLESGEEGFS RLGKRFKMEL VTGIGSAKAT 360 ELETKWKKVR EAELEVYVKR VELVHEQAKL MLEAFKNRA

Sequence ? help Back to Top

Protein Sequence Length: 399 aa Download sequence

MAPKRLKEDP PPAATSSGEE EEDSENDAAS DEEEHEVSNA VQEKEKSDDE EEDEDDDDEE  60
SPAGKLTVIP SSNKGSDNES GSGSDSESES DSFNDKSSPP SPSLSAYTIK PIASKPMEPK  120
KSSAATAAKP INSKKRKVVA SSSAITNGDD EDSKKHTGGV SRLWSDENEL AVLKGMIEYK  180
SKKGLDPISD MGDFHEFIKK NISVEVSKNQ VVDKIRRMKK KYQVNVERAG DNGENPVFSK  240
PHEHRCFELS KKIWGIEAGS TRKAKPPTRG IANNNINSNN NSIAIALPAR KKEKEKEKDK  300
EKEKEACLDN GEVKDEKEEE FVASYPCLNS VLESGEEGFS RLGKRFKMEL VTGIGSAKAT  360
ELETKWKKVR EAELEVYVKR VELVHEQAKL MLEAFKNRA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G61730.1	6e-28	GeBP family protein