PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023871682.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

FAR1

Protein Properties

Length: 668aa MW: 78002.8 Da PI: 6.6519

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023871682.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	77.9	1.9e-24	59	143	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fYn YAk+ GF +r+s+s +++++e +++++ Cs g++++++ + ++r+etrtgC a++++++ ++++w++ ++eleHnH+++ XP_023871682.1 59 DFYNMYAKQQGFGIRVSNSWFRSKKKERYRAKLSCSSAGFKKKSEAN-----NPRPETRTGCPAMIVIRLVDSKRWRIVEVELEHNHQVS 143 6***************************************99888.....9********************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 668 aa Download sequence
MEEVCLNSEP VFDEGDEYDV EGDCTLVEHD DETGETQLKK EPPSPTVGLE FDSFDEAYDF 60 YNMYAKQQGF GIRVSNSWFR SKKKERYRAK LSCSSAGFKK KSEANNPRPE TRTGCPAMIV 120 IRLVDSKRWR IVEVELEHNH QVSPQIKRFY KSHKKMILAA KKAQPSPEPV TEVHTIKLYR 180 TAVLEADHIG YSNFNEGINP VDNSKHLELK EGDAHAVYNY FCRMKLTNPN FFYLFDLDDD 240 GRLRNVFWAD ARSRAAYGYF CDTVAIDTTC LANKYEIPLI SFVGVNQHGQ SVLLGCGFLG 300 HESVEYFVWI LRSWLKCMLG CPPQVIITDQ CKPLQTAVCE VFPNAHHCYC MWYIMQRVPE 360 KLGGLKGYEA IKRQLNKAVY DSLKIAEFET SWADMIKQHR LGDNKWLQTL YEDRQMWVPV 420 YLKDTFFAGM IPIRENEGLN AFFEGYVHKH TSFKEFVDKY DLALHRKHLK EAMADLESRN 480 SSFEMKTRCN FELQVSKVYT KEIFKRFQSE VEGMYSCFNT RQVNVNGPII TYIVKERVEV 540 EGNEKEVKYY EVLYETTQVD IRCICSLFNY KGYLCRHALN VLNYNGVEEI PSRYILQRWS 600 KDFKCRYLLD NKSGNIDVYN PMHWYNHLHK CALPIVEEGA QSQEHYKIAL QELEELLNKF 660 NNVANDFV

Sequence ? help Back to Top

Protein Sequence Length: 668 aa Download sequence

MEEVCLNSEP VFDEGDEYDV EGDCTLVEHD DETGETQLKK EPPSPTVGLE FDSFDEAYDF  60
YNMYAKQQGF GIRVSNSWFR SKKKERYRAK LSCSSAGFKK KSEANNPRPE TRTGCPAMIV  120
IRLVDSKRWR IVEVELEHNH QVSPQIKRFY KSHKKMILAA KKAQPSPEPV TEVHTIKLYR  180
TAVLEADHIG YSNFNEGINP VDNSKHLELK EGDAHAVYNY FCRMKLTNPN FFYLFDLDDD  240
GRLRNVFWAD ARSRAAYGYF CDTVAIDTTC LANKYEIPLI SFVGVNQHGQ SVLLGCGFLG  300
HESVEYFVWI LRSWLKCMLG CPPQVIITDQ CKPLQTAVCE VFPNAHHCYC MWYIMQRVPE  360
KLGGLKGYEA IKRQLNKAVY DSLKIAEFET SWADMIKQHR LGDNKWLQTL YEDRQMWVPV  420
YLKDTFFAGM IPIRENEGLN AFFEGYVHKH TSFKEFVDKY DLALHRKHLK EAMADLESRN  480
SSFEMKTRCN FELQVSKVYT KEIFKRFQSE VEGMYSCFNT RQVNVNGPII TYIVKERVEV  540
EGNEKEVKYY EVLYETTQVD IRCICSLFNY KGYLCRHALN VLNYNGVEEI PSRYILQRWS  600
KDFKCRYLLD NKSGNIDVYN PMHWYNHLHK CALPIVEEGA QSQEHYKIAL QELEELLNKF  660
NNVANDFV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52520.1	0.0	FAR1 family protein