PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023872035.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family NAC
Protein Properties Length: 311aa    MW: 35745.1 Da    PI: 6.4201
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023872035.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM172.71.1e-5371351128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 
                     +ppGfrFhPt+eelv +yL++k+++ k++l +vi+++d+yk+ePwd++   k+   e++ewyfFs++dkky+tg+r+nrat++g+Wkatg+dk+v
  XP_023872035.1   7 VPPGFRFHPTEEELVGYYLRRKINSLKIDL-DVIADIDLYKMEPWDIQDrcKLGYdEQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAV 100
                     69****************************.9***************952433223677************************************ PP

             NAM  93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     ls k++ +g++ktLvfykgrap+g+k+dW+mheyrl
  XP_023872035.1 101 LS-KNRIIGMRKTLVFYKGRAPNGRKSDWIMHEYRL 135
                     **.8999***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
MEMESCVPPG FRFHPTEEEL VGYYLRRKIN SLKIDLDVIA DIDLYKMEPW DIQDRCKLGY  60
DEQNEWYFFS HKDKKYPTGT RTNRATAAGF WKATGRDKAV LSKNRIIGMR KTLVFYKGRA  120
PNGRKSDWIM HEYRLQTSEH GPLQEEGWVV CRAFKKPTPN YRQGFQAWNA YYVRDNCQVM  180
PPSYSHIAST TQAFNPNQAA TFHEPITSLQ QELVCNHTLL DNQLVELPRL DSPTLSTSLA  240
TKEGFQHNGI ANNEDFDGIS SQYVDWKNLD DLLASQFTGT TSYPNLPLIS QNNELGAQNN  300
DSHLLGCFPD L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71930.11e-109NAC family protein