PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023872092.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

FAR1

Protein Properties

Length: 662aa MW: 77120.1 Da PI: 7.8747

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023872092.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	58.2	2.6e-18	50	136	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 k+Y +Y+ke GF v k++skk ++ge+ t C++ gk+++++++ + ++e++t+Cka+l+ + dgkw ++ ++l+HnH l+p XP_023872092.1 50 KYYTRYGKEKGFAVAKRSSKKG-DDGEVRYVTIACNRAGKPRNRSSN---PLKLQSESKTDCKAQLRAVLCPDGKWILNAMVLDHNHGLSP 136 69************998887.9999************9988...8899999*****************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 662 aa Download sequence
MEEEKKIGSS HVELNENNIE NATEETRNVK DKIEDPKVGM MFNSIDDIMK YYTRYGKEKG 60 FAVAKRSSKK GDDGEVRYVT IACNRAGKPR NRSSNPLKLQ SESKTDCKAQ LRAVLCPDGK 120 WILNAMVLDH NHGLSPSRTR YYKCNRLLEP HAKKRFASND KADIRMKKSL KSFVIEAGGH 180 ENLSFIEKDC RNKLSCLHLG EGDVAAMQDF FLKMQVDNSD FFYTMDFNEN GRLRNVFWAD 240 ARSRATFKEF GDVVMFDTTY LVNKYNIPFA HFVGVNHHGQ STLLGCGLIS NEDTETFTWL 300 FQTWLKCMFG CPPCAIVTDH DKAMKKAIEI VFPKARHRWC LLHIMDKLSK KLRGYKEYES 360 IKICMQNAVY DSLTKEGFEE SWGKFVEKYK LESNEWLLGL YDERHRWAPA FVKDMFWAGM 420 STTKQGESMH AFFDGYINLK TTLKQFLDQY EPAIAKKVIN ENNEDFDSFN LCIPCITHYE 480 MEKQFQSAYT IAKFKEFQRE LIGNICCNLF SCKKGTVFSE YELHEDVSLG ESHQPAIFSV 540 FVNEDTNDVN CNCRLFEFRG ILCRHQIMVF IHREVYRIPD KYILKRWSKT GIRSQNKVQI 600 SYDNWFVKPE AQRYDKMCKA FYEVANLAAD SEDRCDKVMA QIQELKREFE NEEGVCGRNK 660 PI

Sequence ? help Back to Top

Protein Sequence Length: 662 aa Download sequence

MEEEKKIGSS HVELNENNIE NATEETRNVK DKIEDPKVGM MFNSIDDIMK YYTRYGKEKG  60
FAVAKRSSKK GDDGEVRYVT IACNRAGKPR NRSSNPLKLQ SESKTDCKAQ LRAVLCPDGK  120
WILNAMVLDH NHGLSPSRTR YYKCNRLLEP HAKKRFASND KADIRMKKSL KSFVIEAGGH  180
ENLSFIEKDC RNKLSCLHLG EGDVAAMQDF FLKMQVDNSD FFYTMDFNEN GRLRNVFWAD  240
ARSRATFKEF GDVVMFDTTY LVNKYNIPFA HFVGVNHHGQ STLLGCGLIS NEDTETFTWL  300
FQTWLKCMFG CPPCAIVTDH DKAMKKAIEI VFPKARHRWC LLHIMDKLSK KLRGYKEYES  360
IKICMQNAVY DSLTKEGFEE SWGKFVEKYK LESNEWLLGL YDERHRWAPA FVKDMFWAGM  420
STTKQGESMH AFFDGYINLK TTLKQFLDQY EPAIAKKVIN ENNEDFDSFN LCIPCITHYE  480
MEKQFQSAYT IAKFKEFQRE LIGNICCNLF SCKKGTVFSE YELHEDVSLG ESHQPAIFSV  540
FVNEDTNDVN CNCRLFEFRG ILCRHQIMVF IHREVYRIPD KYILKRWSKT GIRSQNKVQI  600
SYDNWFVKPE AQRYDKMCKA FYEVANLAAD SEDRCDKVMA QIQELKREFE NEEGVCGRNK  660
PI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-116	FAR1 family protein