PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023872201.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family FAR1
Protein Properties Length: 250aa    MW: 28276 Da    PI: 9.9234
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023872201.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR181.21.9e-2575163291
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                     fYn+Y+ ++GF  r+s+ ++s+ +++i+ rt+vC+keg+r ++k+  +k  r+r+ tr+gCka+l +kk ++gkw vtk+++eH+H l+p
  XP_023872201.1  75 FYNAYGMRMGFIPRVSNLSRSRLDKSIIGRTWVCNKEGYRVPDKHG-TKIVRSRSPTRVGCKAMLSIKKLSTGKWFVTKFVKEHTHVLVP 163
                     ******************************************9999.9**************************************9985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    
MMDSECHTNV RDGNLDNSSD VELRLSNEVA TVRSSHLAQT GEMSQNSSRA ESTAVERDEP  60
YVGQEFESEA AAHAFYNAYG MRMGFIPRVS NLSRSRLDKS IIGRTWVCNK EGYRVPDKHG  120
TKIVRSRSPT RVGCKAMLSI KKLSTGKWFV TKFVKEHTHV LVPGKGRKSS MYNQFPNEHT  180
RIQVQELTKQ LLVERKRSAS YRGIIDILFK HIEDHTHYLS EKVQNIADCV KEIASEGKSV  240
KSSNTLGNKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59470.22e-75FAR1 family protein