PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023872289.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family FAR1
Protein Properties Length: 197aa    MW: 21751.5 Da    PI: 6.9118
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023872289.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR181.91.1e-2579168290
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                     fY++Y+ +vGF +r+++ ++sk +g+++ rt vC+keg+r+  + + ++k+ ++r+ tr+gCka+l v+k ++gkw+vtk+++eH+H+l+
  XP_023872289.1  79 FYSAYSMRVGFITRINYLSRSKLDGSVIGRTIVCNKEGYRKAYRCDiNKKNIKPRTPTRVGCKAMLSVRKLSTGKWVVTKFVKEHTHALT 168
                     9****************************************999987788899***********************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 197 aa     Download sequence    
MDPELAVDIQ NGVGDNSTDI ELELGNDGAM IGSSFEEVSC LGQNNEMTHE SSREGGTVVE  60
GDEPYVGREF ESEEAAHAFY SAYSMRVGFI TRINYLSRSK LDGSVIGRTI VCNKEGYRKA  120
YRCDINKKNI KPRTPTRVGC KAMLSVRKLS TGKWVVTKFV KEHTHALTAV NSQNCSIINQ  180
IPNENMKIPR INSTAAP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59470.22e-50FAR1 family protein