PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023872445.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family ERF
Protein Properties Length: 223aa    MW: 24718.4 Da    PI: 6.5178
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023872445.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.41.1e-2054103255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+W+AeIrdp+    + +r++lg+f+tae+Aa a+++a+++++g
  XP_023872445.1  54 HYRGVRQRP-WGKWAAEIRDPK----KaARVWLGTFDTAEDAAMAYDKAALRFKG 103
                     7********.**********94....45***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    
MSAMVSALTQ VIGTVDEKPT LVQSTPLAIR ECAVKEEPDS SQPVQDQEIA RRRHYRGVRQ  60
RPWGKWAAEI RDPKKAARVW LGTFDTAEDA AMAYDKAALR FKGTKAKLNF PERVQGKTEF  120
GYLTGTHGNT SGVSHEQNPS PVIPPPPPLP FMSQQEAFPG LYQYAQLLSS TDIEFPGYTS  180
NLFNQQSFAS QFSSSSPSST TSSHQQQHQE EHGKDFDSSN PSE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13330.13e-41ERF family protein