PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023872648.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

AP2

Protein Properties

Length: 681aa MW: 75387.5 Da PI: 6.9595

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023872648.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	50.9	3.9e-16	322	381	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d ++ g ++ ++++lg ++ +e+Aa+a++ a++k++g XP_023872648.1 322 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqtRKgRQVYLGGYDMEEKAARAYDLAALKYWG 381 78*****************988886678446***********************98 PP
2	AP2	45.6	1.7e-14	426	475	3	55
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g XP_023872648.1 426 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 475 9*************988532...5**********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 681 aa Download sequence
MKSMNDNSGS NNNWLGFSLS PHMKMEVPSD PQQQHQYHHH QQGQASSAAV SSAPPPTSYY 60 LNTPAGICYL VGENAGFHSP LSVMPLKSDG SLCIMEALTR SQPEGMVPSS SPKLEDFLGG 120 ASMGTHEYGT HEREAMALSL DSIYYNQNAE AETNREHSLG LLQEPYRQQE QHIPVQTHPY 180 YTGLHCHGIY QTPLEDESKQ THIADCDSQI PHMAEDGIPC LKNWVARQYS AHHALEQQMN 240 GNIVDDNGAS GSVNAMGCGD LQSLSLSMSP GSQSSCVTAP RQISPAGTEC VAMETKKRGP 300 GKVGHKQPVH RKSIDTFGQR TSQYRGVTRH RWTGRYEAHL WDNSCKKEGQ TRKGRQVYLG 360 GYDMEEKAAR AYDLAALKYW GPSTHINFPL ENYQSELEEM KNMSRQEYVA HLRRKSSGFS 420 RGASMYRGVT RHHQHGRWQA RIGRVAGNKD LYLGTFSTQE EAAEAYDIAA IKFRGVNAVT 480 NFDITRYDVE RIMASNTLLA GELARRNKDS DSRTEAIDYN PPMHNGGEAN QTENGNGNGN 540 SSDWKMALYQ STQQQQQQHP HACVESLDHQ KSVNYRNPSF SMALQDLIGI DSVNSSQAMV 600 DDSSKFGTHF SNPSSLVTSL SSSREPSPDK TGSTMLFAKP PSASKFISPA TGVSSWFQSP 660 QLRPTPISMS HLPVFAAWTD T

Sequence ? help Back to Top

Protein Sequence Length: 681 aa Download sequence

MKSMNDNSGS NNNWLGFSLS PHMKMEVPSD PQQQHQYHHH QQGQASSAAV SSAPPPTSYY  60
LNTPAGICYL VGENAGFHSP LSVMPLKSDG SLCIMEALTR SQPEGMVPSS SPKLEDFLGG  120
ASMGTHEYGT HEREAMALSL DSIYYNQNAE AETNREHSLG LLQEPYRQQE QHIPVQTHPY  180
YTGLHCHGIY QTPLEDESKQ THIADCDSQI PHMAEDGIPC LKNWVARQYS AHHALEQQMN  240
GNIVDDNGAS GSVNAMGCGD LQSLSLSMSP GSQSSCVTAP RQISPAGTEC VAMETKKRGP  300
GKVGHKQPVH RKSIDTFGQR TSQYRGVTRH RWTGRYEAHL WDNSCKKEGQ TRKGRQVYLG  360
GYDMEEKAAR AYDLAALKYW GPSTHINFPL ENYQSELEEM KNMSRQEYVA HLRRKSSGFS  420
RGASMYRGVT RHHQHGRWQA RIGRVAGNKD LYLGTFSTQE EAAEAYDIAA IKFRGVNAVT  480
NFDITRYDVE RIMASNTLLA GELARRNKDS DSRTEAIDYN PPMHNGGEAN QTENGNGNGN  540
SSDWKMALYQ STQQQQQQHP HACVESLDHQ KSVNYRNPSF SMALQDLIGI DSVNSSQAMV  600
DDSSKFGTHF SNPSSLVTSL SSSREPSPDK TGSTMLFAKP PSASKFISPA TGVSSWFQSP  660
QLRPTPISMS HLPVFAAWTD T

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37750.1	1e-131	AP2 family protein