PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023872654.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

bHLH

Protein Properties

Length: 431aa MW: 46524.6 Da PI: 5.8528

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023872654.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	31.1	4.3e-10	273	321	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L+el+P + +k Ka +L + ++Y++sLq XP_023872654.1 273 NSHSLAERVRREKISERMRLLQELVPGC----NKITGKAVMLDEIINYVQSLQ 321 58************************....999***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 431 aa Download sequence
MDGHENEDVG FQHGSEGLLN CPSSRMSTNP LPEKVSGMTM SCVSMYKPSN GADPFFGSGW 60 DPLVSLSQSE NFGGSSMVSH GEYPPYPVVM ENQGISTASH LVQYPSSSSF VELVPKLPCF 120 GSGSFSEMVN SFGLPECNQI ANSGCPQNYA SNKEVATGRT STNGAQSKDD HQVSGEGAIG 180 SSPNAKRRKR VPDSNNLAFS PNQNGEGDVQ KDLSGESSDG QKEQDEKKPK IEQNTGSNLR 240 GKQTSKQAKD TSSGDATKDN YIHVRARRGQ ATNSHSLAER VRREKISERM RLLQELVPGC 300 NKITGKAVML DEIINYVQSL QQQVEFLSMK LATVNPELNI DIEQILSKDI IQSRGGTGAI 360 LGFGPGMSSS HPYPHGIYQG TLPSIPSTTP KYPSLSQNVL DNDFQSLFQM GFDSNSAIDN 420 LGPNGNLQKF V

Sequence ? help Back to Top

Protein Sequence Length: 431 aa Download sequence

MDGHENEDVG FQHGSEGLLN CPSSRMSTNP LPEKVSGMTM SCVSMYKPSN GADPFFGSGW  60
DPLVSLSQSE NFGGSSMVSH GEYPPYPVVM ENQGISTASH LVQYPSSSSF VELVPKLPCF  120
GSGSFSEMVN SFGLPECNQI ANSGCPQNYA SNKEVATGRT STNGAQSKDD HQVSGEGAIG  180
SSPNAKRRKR VPDSNNLAFS PNQNGEGDVQ KDLSGESSDG QKEQDEKKPK IEQNTGSNLR  240
GKQTSKQAKD TSSGDATKDN YIHVRARRGQ ATNSHSLAER VRREKISERM RLLQELVPGC  300
NKITGKAVML DEIINYVQSL QQQVEFLSMK LATVNPELNI DIEQILSKDI IQSRGGTGAI  360
LGFGPGMSSS HPYPHGIYQG TLPSIPSTTP KYPSLSQNVL DNDFQSLFQM GFDSNSAIDN  420
LGPNGNLQKF V

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10120.1	1e-82	bHLH family protein