PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023873029.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

C2H2

Protein Properties

Length: 1154aa MW: 126702 Da PI: 6.6125

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023873029.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	19.5	2.6e-06	38	60	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C C++sF r ++LkrH r+H XP_023873029.1 38 HVCATCTRSFARLEHLKRHERSH 60 79*******************99 PP
2	zf-C2H2	21.7	5.3e-07	66	89	1	23
EEETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23 ++Cp C+++F r+++L rH+++ H XP_023873029.1 66 FECPECTRCFARRDLLLRHQQKlH 89 89*******************988 PP

Sequence ? help Back to Top
Protein Sequence Length: 1154 aa Download sequence
MYTASRPSAN GGATTVLQSG MSLNNQFPPP KTDKPRPHVC ATCTRSFARL EHLKRHERSH 60 TKEKPFECPE CTRCFARRDL LLRHQQKLHL TNTTSSRPRA NRRESTSSTL STATKVRKNS 120 VANLNSIGMG SGMQRPRANT ISHLDFGSLG LGDGTSGNFG RLNALGINQT HTSGMNGPPM 180 NFNYQGMSTN INHHANSHGL PRLDMHNVNG MDTSNMLRTA PPMASFEAST GFSLDQLFGP 240 GNTINPAQLH SAPPLTSGDG NDNFQAFSDL PPTIPEGDDF GWMRNWNMQM HGQDINEQAI 300 DESSPSRLSS GDSPDDFNDS LANSANIVMP THQNTMGWGH QDLSLHQTIS NVSNFSNFSN 360 NSFHLDSFGN HLSSLDDQTI SPSHLHDHAA QGDAYFHQNM MQQGTPSQLH HQPDMANGHV 420 ANLFAPSLSN FSSDSPNMSN SSMNGSAPQS SVTSASTDSI TEATRQALLY NLSQPSVFGS 480 SHRKFSQPSI SSPLTPGAGL PRNGLQGPSL PSVDDIRRYV DAFIHCSHPH MPVCHVPTLS 540 FDPNDDLNFV KLQGDRSYSD SLAGGGCLIL SMAAIGALHE YDHPTSKELF EAAKKMISIY 600 LEERRKADMS AAINGNSDLA RQTPLWLVQA MLLNVIYGHQ CGDKTAADIA SNHCAALVSL 660 AKAAELARPS RSKLQGQGTD ASRTDNDLSE MDLNTQWLQW KLEETRKRTF FAIFILSSLL 720 TTAYNQTPTI MNSEILLDLP CDEALWAAET AQQWQQRGGI AAIDAASISF AGALSTLLTA 780 NQRQGSKRTG HMSNNPLETL QSSETDSSET DSSDFRPSTF GCLVLISALH NYIWETRSRH 840 HSRHWTLQET ESMFSHIEPA LNAWQAAWKA NEHHRLERPN PFGLGPLSAD SIPLLDQAFV 900 RLYVNLGRSK EAFWARDFDT MSNELARGKE IVQHAEPDDM EGDHEHRTTN GHAVNAQRRT 960 SQAQAGGQAS SRRERHLRKA AFYAADSLTI ACNYNLTYAD GGAHELPIQS AMCFFDCAQV 1020 LAEWAGTVQE RVGRYLGVLG RDQIDFTQVP AIMLLETEDV DLLRKIEHIT DSLEAKRYQQ 1080 EHLLGGNVSQ MNGFAATAMH NNVHLASCGY GSKILRVAGM MLEKAVVWPV THVMAKALET 1140 QAGHMDQRSD SSCT

Sequence ? help Back to Top

Protein Sequence Length: 1154 aa Download sequence

MYTASRPSAN GGATTVLQSG MSLNNQFPPP KTDKPRPHVC ATCTRSFARL EHLKRHERSH  60
TKEKPFECPE CTRCFARRDL LLRHQQKLHL TNTTSSRPRA NRRESTSSTL STATKVRKNS  120
VANLNSIGMG SGMQRPRANT ISHLDFGSLG LGDGTSGNFG RLNALGINQT HTSGMNGPPM  180
NFNYQGMSTN INHHANSHGL PRLDMHNVNG MDTSNMLRTA PPMASFEAST GFSLDQLFGP  240
GNTINPAQLH SAPPLTSGDG NDNFQAFSDL PPTIPEGDDF GWMRNWNMQM HGQDINEQAI  300
DESSPSRLSS GDSPDDFNDS LANSANIVMP THQNTMGWGH QDLSLHQTIS NVSNFSNFSN  360
NSFHLDSFGN HLSSLDDQTI SPSHLHDHAA QGDAYFHQNM MQQGTPSQLH HQPDMANGHV  420
ANLFAPSLSN FSSDSPNMSN SSMNGSAPQS SVTSASTDSI TEATRQALLY NLSQPSVFGS  480
SHRKFSQPSI SSPLTPGAGL PRNGLQGPSL PSVDDIRRYV DAFIHCSHPH MPVCHVPTLS  540
FDPNDDLNFV KLQGDRSYSD SLAGGGCLIL SMAAIGALHE YDHPTSKELF EAAKKMISIY  600
LEERRKADMS AAINGNSDLA RQTPLWLVQA MLLNVIYGHQ CGDKTAADIA SNHCAALVSL  660
AKAAELARPS RSKLQGQGTD ASRTDNDLSE MDLNTQWLQW KLEETRKRTF FAIFILSSLL  720
TTAYNQTPTI MNSEILLDLP CDEALWAAET AQQWQQRGGI AAIDAASISF AGALSTLLTA  780
NQRQGSKRTG HMSNNPLETL QSSETDSSET DSSDFRPSTF GCLVLISALH NYIWETRSRH  840
HSRHWTLQET ESMFSHIEPA LNAWQAAWKA NEHHRLERPN PFGLGPLSAD SIPLLDQAFV  900
RLYVNLGRSK EAFWARDFDT MSNELARGKE IVQHAEPDDM EGDHEHRTTN GHAVNAQRRT  960
SQAQAGGQAS SRRERHLRKA AFYAADSLTI ACNYNLTYAD GGAHELPIQS AMCFFDCAQV  1020
LAEWAGTVQE RVGRYLGVLG RDQIDFTQVP AIMLLETEDV DLLRKIEHIT DSLEAKRYQQ  1080
EHLLGGNVSQ MNGFAATAMH NNVHLASCGY GSKILRVAGM MLEKAVVWPV THVMAKALET  1140
QAGHMDQRSD SSCT