PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023873133.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family LFY
Protein Properties Length: 120aa    MW: 13569.5 Da    PI: 9.9923
Description LFY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023873133.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FLO_LFY2478.9e-761106281386
         FLO_LFY 281 vtnqvfryakkagasyinkPkmrhYvhCYalhcLdeeasnalrrafkergenvGawrqacykplvaiaarqgwdidavfnahprLsiWYvPtkLr 375
                     vtnqvfr+akkagasyinkPkmrhYvhCYalhcLdeeasnalrr fkergenvGawrqacykplvaiaarqgwdida+fnahprLs+WYvPtkLr
  XP_023873133.1   1 VTNQVFRFAKKAGASYINKPKMRHYVHCYALHCLDEEASNALRRGFKERGENVGAWRQACYKPLVAIAARQGWDIDAIFNAHPRLSVWYVPTKLR 95 
                     9********************************************************************************************** PP

         FLO_LFY 376 qLChlerskas 386
                     qLCh+er++a+
  XP_023873133.1  96 QLCHAERNHAT 106
                     *******9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 120 aa     Download sequence    
VTNQVFRFAK KAGASYINKP KMRHYVHCYA LHCLDEEASN ALRRGFKERG ENVGAWRQAC  60
YKPLVAIAAR QGWDIDAIFN AHPRLSVWYV PTKLRQLCHA ERNHATASSS VSGGADHMPF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61850.17e-69LFY family protein