PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023873175.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family WRKY
Protein Properties Length: 261aa    MW: 29709.2 Da    PI: 4.742
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023873175.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY962.6e-3053111259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     +D ++WrKYGqK++kgs++pr+YYrC+++ gC++kk+ver+++d ++++itY+++Hnh+
  XP_023873175.1  53 SDFWSWRKYGQKPIKGSPYPRGYYRCSTSkGCSAKKQVERCRNDASMLIITYTSSHNHP 111
                     699***********************9988****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    
MDDSLFPKLD KEVSRELKPE TQASKRRKMV QKTVVTVRIG ANVGKLKNEG PPSDFWSWRK  60
YGQKPIKGSP YPRGYYRCST SKGCSAKKQV ERCRNDASML IITYTSSHNH PGPDLSTTNL  120
IQLAEEPKTH STVDLQTTLK EEQQELAQEE EKQNEPTMTT KEKEPGEDHF LYIQSPISSS  180
QDIIVNQAED PFTVNLEKPH ETMGLVLDEE PLCYSQLMNF STPMSEENDF FDELEELPTS  240
SSFTSFMTSN FSEERIPVVP S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34830.11e-35WRKY family protein