PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023873399.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family WOX
Protein Properties Length: 247aa    MW: 27724.8 Da    PI: 8.4244
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023873399.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox65.19.4e-211978357
                    --SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox  3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                    +R+++tkeq+  Le+l+++  r+psa+++++++++l    +++ ++V++WFqN++a++++
  XP_023873399.1 19 SRWNPTKEQISMLESLYRQgIRTPSADQIQQITSRLrvygHIEGKNVFYWFQNHKARQRQ 78
                    7*****************99**************************************97 PP
2Wus_type_Homeobox116.11.7e-371780265
  Wus_type_Homeobox  2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
                       +++RW+Pt+eQi +Le+ly++G+rtP++++iq+it++L+ yG+ie+kNVfyWFQN+kaR+rqkq
     XP_023873399.1 17 VSSRWNPTKEQISMLESLYRQGIRTPSADQIQQITSRLRVYGHIEGKNVFYWFQNHKARQRQKQ 80
                       579***********************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    
MEGDNNKDMG GASGAPVSSR WNPTKEQISM LESLYRQGIR TPSADQIQQI TSRLRVYGHI  60
EGKNVFYWFQ NHKARQRQKQ KQESMAYINR YFHTTPPLFS PPCPNVLGGP YYLPHNDVRF  120
YPQYQHSKVL LPSGIRGRPR TEKLEKPRAL DGAAYNSAHQ GYGMAMHIGN STSDITNNYS  180
HYGQETLPLF PLHPTGILQG KTGKSCIDSS AENSTTTTPS SSEIEEGSGN YQPFFDFFFG  240
QGSCESD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G59340.12e-52WOX family protein