PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023873527.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family ERF
Protein Properties Length: 237aa    MW: 26049 Da    PI: 5.317
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023873527.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.53.8e-193989155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                    + ykGVr++  +g+WvAeIr+p   + r +r +lg+f+t  eAa a++aa+ kl+g
  XP_023873527.1 39 CSYKGVRQRT-WGKWVAEIREP---N-RgARLWLGTFDTSHEAAMAYDAAAHKLYG 89
                    67*****999.**********8...3.35************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MLKSGTASLG EKKQAKRSAQ ASSRKGCMRG KGGPENAMCS YKGVRQRTWG KWVAEIREPN  60
RGARLWLGTF DTSHEAAMAY DAAAHKLYGT DAKLNLPDVT LNSQHPATSI DTQINPMETH  120
PQGVHNSGTV CSSNNSPIVE FDDFTSQPYQ NDSIMSFPNG YVESNEKQEV NILKFGENKE  180
IDGLWDSMKA NFPVFDETIW TEAAMSLDFP VMGDSGIFAG NLTDGSGWDA LHSPWCM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75490.11e-47ERF family protein