PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023873634.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

FAR1

Protein Properties

Length: 671aa MW: 77538.3 Da PI: 7.209

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023873634.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	47	8.3e-15	116	201	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +++ +Y+++ GF v+k++s+k ++ge+ + t +C++ ++ + ++ + + +++++tgCka++++ + + w ++++el+HnH l+p XP_023873634.1 116 EYFTRYGNKKGFAVVKRTSRKG-NDGEVESLTVTCNRAEMQQIKASN---SLKAQPQSKTGCKAHFNMIRC-LDGWILKSMELDHNHGLSP 201 589************99997.9999*******999998877...89999*******99999.899***********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 671 aa Download sequence
MFSENDEAGV GAVIRDSMWQ IIAALAEKIQ KLFSQWRSQE FDLGGHMKEE ITSASRLVEL 60 NEHNSDNEMK DTVDLKNNEL NKDNVENEKE ETRKVEDKVE DACVGMLFGS IDDIMEYFTR 120 YGNKKGFAVV KRTSRKGNDG EVESLTVTCN RAEMQQIKAS NSLKAQPQSK TGCKAHFNMI 180 RCLDGWILKS MELDHNHGLS PSKTRFYKCN SVLKPHVKRQ LELNAKADIK MNKSFNSLVV 240 EAGGHENLPF LEKDCRNHMD KVKRLELREG DAVAMNKYFL KMQANNSNFF YMMDFTEDGQ 300 LKNVFWADAR SREAFKEFGD VVTFDTMYLV NKYSMPFAPF VGVNHHGQSI LLGCGLISGE 360 DADTFRWLFE SWLTCMSGVP PSAIITDQDK AIKKAIQIVF PKARHRWYYW VPAFVKDTFW 420 AGMSTTQQSE SINAFFDGYV HHETTLKEFV KQYDKALAKN VVNENTEDFN SFQSSIPCFT 480 HYAMEKQFQS VYTIAKYKEF RKELQGKVCC NFSLCKEDGV ISEYEIREDG AFGENSEHAT 540 FLVYFNKDTN EVNCNCRFFE FRGILCRHQI TVLFHMKIDQ VPNKYILKRW CNNIKRSHTK 600 VRINYDNRLV KPKTQRFDKM YKVFNEVADL AVDSDDKCEK VVARILELKG EFKQEKLVCG 660 SNEPIFAGIN C

Sequence ? help Back to Top

Protein Sequence Length: 671 aa Download sequence

MFSENDEAGV GAVIRDSMWQ IIAALAEKIQ KLFSQWRSQE FDLGGHMKEE ITSASRLVEL  60
NEHNSDNEMK DTVDLKNNEL NKDNVENEKE ETRKVEDKVE DACVGMLFGS IDDIMEYFTR  120
YGNKKGFAVV KRTSRKGNDG EVESLTVTCN RAEMQQIKAS NSLKAQPQSK TGCKAHFNMI  180
RCLDGWILKS MELDHNHGLS PSKTRFYKCN SVLKPHVKRQ LELNAKADIK MNKSFNSLVV  240
EAGGHENLPF LEKDCRNHMD KVKRLELREG DAVAMNKYFL KMQANNSNFF YMMDFTEDGQ  300
LKNVFWADAR SREAFKEFGD VVTFDTMYLV NKYSMPFAPF VGVNHHGQSI LLGCGLISGE  360
DADTFRWLFE SWLTCMSGVP PSAIITDQDK AIKKAIQIVF PKARHRWYYW VPAFVKDTFW  420
AGMSTTQQSE SINAFFDGYV HHETTLKEFV KQYDKALAKN VVNENTEDFN SFQSSIPCFT  480
HYAMEKQFQS VYTIAKYKEF RKELQGKVCC NFSLCKEDGV ISEYEIREDG AFGENSEHAT  540
FLVYFNKDTN EVNCNCRFFE FRGILCRHQI TVLFHMKIDQ VPNKYILKRW CNNIKRSHTK  600
VRINYDNRLV KPKTQRFDKM YKVFNEVADL AVDSDDKCEK VVARILELKG EFKQEKLVCG  660
SNEPIFAGIN C

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76320.2	1e-84	FAR1 family protein