PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023873779.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

bHLH

Protein Properties

Length: 218aa MW: 24153.9 Da PI: 10.8931

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023873779.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38.7	1.7e-12	50	96	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h+e+ErrRR riN +++Lr++lP++ K++Ka++L ++v+ +++L XP_023873779.1 50 KKHSEAERRRRMRINGQYATLRDILPNL-----VKMDKATVLAETVRQVREL 96 68***********************9.....7**********988877 PP

Sequence ? help Back to Top
Protein Sequence Length: 218 aa Download sequence
MQQFQRYYKS GTCTIQNRFP QGVTSTNTIS HKYSFSKPKS KAEAKQFAAK KHSEAERRRR 60 MRINGQYATL RDILPNLVKM DKATVLAETV RQVRELRKTV SDLEGVCGGS SKDCVFPGGA 120 DKLSLENGDG DDDKGLVKVT FSCEDRPGLI SAVARTLRSM KGRVVKFEMV TLGGRTKSVL 180 WVQGLSGGNE GIGMLRRALK VVIDRPNLPG ISKRSRLT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38070.1	2e-46	bHLH family protein