PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023873799.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

MYB

Protein Properties

Length: 247aa MW: 28674.9 Da PI: 6.1293

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023873799.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51	3.2e-16	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l ++++G +W + ++ g+ R++k+c++rw++yl XP_023873799.1 14 KGAWTPEEDDKLRSFIQRYGHSNWYKLPKLAGLSRCGKSCRLRWLNYL 61 79********************************************97 PP
2	Myb_DNA-binding	57.9	2.4e-18	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T eE++l+++++++ G++ W+ Ia++++ gRt++++k++w+++l XP_023873799.1 67 RGNFTNEEEDLIIKLHEEAGNK-WSMIAKHLP-GRTDNEIKNHWHTHL 112 89******************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 247 aa Download sequence
MVKAPFYDKN GLKKGAWTPE EDDKLRSFIQ RYGHSNWYKL PKLAGLSRCG KSCRLRWLNY 60 LQPGVKRGNF TNEEEDLIIK LHEEAGNKWS MIAKHLPGRT DNEIKNHWHT HLKKHVKQNP 120 KTSEVKEQFN ETSQCKAKKN RESESESLHT SASSHQSLES SPLSTELSSS ELFSLSYDHP 180 PVTGINWAEE DCLTSFETFE DTFGNFWTEP FVADNMNIPD EFPMSPYILY HDDIDSFDQV 240 MQELQKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G23250.1	3e-56	MYB family protein