PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023873932.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family NF-YB
Protein Properties Length: 226aa    MW: 24909.1 Da    PI: 7.3023
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023873932.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB175.64.9e-5554150197
           NF-YB   1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95 
                     vreqdrf+Pianv+rim+k+lP +akis+daket+qecvse+isf+t+ea+++cqre+rkti+++d+lwa+++lGf+dy+epl++yl++yre+eg
  XP_023873932.1  54 VREQDRFMPIANVIRIMRKILPPHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTITAEDVLWAMSKLGFDDYIEPLTLYLHRYREMEG 148
                     69********************************************************************************************* PP

           NF-YB  96 ek 97 
                     ++
  XP_023873932.1 149 DR 150
                     97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
MERGGFHGYR KIPNTNSGLK LTNINMRQLA EMNHTTNNHS TTATITTEDN LCTVREQDRF  60
MPIANVIRIM RKILPPHAKI SDDAKETIQE CVSEYISFIT GEANERCQRE QRKTITAEDV  120
LWAMSKLGFD DYIEPLTLYL HRYREMEGDR GSIRGEPLGK RGSGGSVDFG ALGVAAFAPA  180
FHMGHHHGFF GAAMGGWNLK DAPNGNVAGP SAQAAVASGE PLGQYK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47670.17e-74NF-YB family protein