PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023874003.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

bHLH

Protein Properties

Length: 658aa MW: 74083.4 Da PI: 4.7622

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023874003.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	17.8	5.9e-06	473	506	17	55
HHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 17 NsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 N++f Lr+++P+ + +Ka+iL+ +++Y+k+L+ XP_023874003.1 473 NEKFLVLRSMVPSiS------EIDKASILTDTIKYLKELE 506 9**********66......8*************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 658 aa Download sequence
MANGCQSHEG VPENLRKQLA VAVRSIQWSY AIFWSLSPTQ QGVLNWGDGY YNGDIKTMKT 60 VQTTELKADK IGLQRSEQLR ELYLSLLEDE TDQQQQAKRP SAALSPEDLT DAEWYYLVCM 120 SFVFNPGQGL PGRALASGQT IWLSNAQYAD SKIFSRSLLA KSASIQTVIC FPYLGGVIEL 180 GVTELVSEDP SLLQHIKTSL LELSKPVCSD KSSSAPHKGD DDRDQMCAKV NHEIVDTLGL 240 ENLYSPSEEI KFDQEGINKL GGNIHEEINM DSPDECSNGC EHNYWTEDSF MLEGMNGGAS 300 QVQSWHLMDD DFSNGVQDSM HSSDCISEAF VNQEKAISTP KQENVNHSHL QELQNSNHTK 360 LSSLDLGADD DLHYKRIISA ILGSSAQSIE NRCFHYGDCK SSFLSWKRES IDDAHRPQVH 420 QGMLKKVLFT VPLMYGGDLI RSQKENGGKD WLRKLESDDI CIGNVLSDNR RENEKFLVLR 480 SMVPSISEID KASILTDTIK YLKELEARVE ELESCMDSVD FEGRARRNQD IIEHTSDNYD 540 IKKIDNGKKH WINKRKACDI DETDPELNRV VPEDGLPLDV KVSIKEQEVL IEMRCPYREY 600 ILLDVMDVIN NLHLDVHSVQ SSALDDILTL TLKSKFRGAA IASVGMIKQA LWKIAFKC

Sequence ? help Back to Top

Protein Sequence Length: 658 aa Download sequence

MANGCQSHEG VPENLRKQLA VAVRSIQWSY AIFWSLSPTQ QGVLNWGDGY YNGDIKTMKT  60
VQTTELKADK IGLQRSEQLR ELYLSLLEDE TDQQQQAKRP SAALSPEDLT DAEWYYLVCM  120
SFVFNPGQGL PGRALASGQT IWLSNAQYAD SKIFSRSLLA KSASIQTVIC FPYLGGVIEL  180
GVTELVSEDP SLLQHIKTSL LELSKPVCSD KSSSAPHKGD DDRDQMCAKV NHEIVDTLGL  240
ENLYSPSEEI KFDQEGINKL GGNIHEEINM DSPDECSNGC EHNYWTEDSF MLEGMNGGAS  300
QVQSWHLMDD DFSNGVQDSM HSSDCISEAF VNQEKAISTP KQENVNHSHL QELQNSNHTK  360
LSSLDLGADD DLHYKRIISA ILGSSAQSIE NRCFHYGDCK SSFLSWKRES IDDAHRPQVH  420
QGMLKKVLFT VPLMYGGDLI RSQKENGGKD WLRKLESDDI CIGNVLSDNR RENEKFLVLR  480
SMVPSISEID KASILTDTIK YLKELEARVE ELESCMDSVD FEGRARRNQD IIEHTSDNYD  540
IKKIDNGKKH WINKRKACDI DETDPELNRV VPEDGLPLDV KVSIKEQEVL IEMRCPYREY  600
ILLDVMDVIN NLHLDVHSVQ SSALDDILTL TLKSKFRGAA IASVGMIKQA LWKIAFKC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G41315.1	1e-170	bHLH family protein