PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023874105.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

FAR1

Protein Properties

Length: 693aa MW: 79939.8 Da PI: 6.6046

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023874105.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	76.6	5.1e-24	72	163	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 ++Y+++A++ GFs+rk++s++s++ g +++r+fvC+++g+++++kk+++++ r r++ r+gC+akl ++ke +w+v+++++ HnHel XP_023874105.1 72 EYYSNFARKNGFSIRKARSTESQNLG-VYRRDFVCYRSGFNQPRKKANVEHPRDRKSVRCGCDAKLYLSKEIidnVTQWYVSQFSNVHNHELL 163 69******************8888.**************************************997766789***********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 693 aa Download sequence
MSMKPSNNIW IRRQQCPCGD WKCYIKYEGD DQSSVSSQLV KSETTASSSS SSEAVFTPYV 60 GQIFKSDDDA FEYYSNFARK NGFSIRKARS TESQNLGVYR RDFVCYRSGF NQPRKKANVE 120 HPRDRKSVRC GCDAKLYLSK EIIDNVTQWY VSQFSNVHNH ELLEDDQVRL LPAYRKIQEA 180 DQERILLLSK AGFPVNRIVK VLELEKGVQP GQLPFIEKDV RNFVRTCKKT VQENDALLSE 240 KRENDMMELV DACKAMVERD PDFLYDCTTD ENGKVENIAW TFGDSVRAYT VFGDVVTFDT 300 TYRSITYGLH LGVWFGIDSH GKAIFFGSVL LQEENSHSFA WALQTFVRFM RGRRPQTILT 360 DIDSGLRDAI ARELPNTKHV ISISHILSKL SSWFSLPLGS QYPDFKADFD MLCHLESVED 420 FEHQWNLLVA RFGLVPDKHI ALLFSYRASW PLSYIRSYFL AHMLTAEFSQ SLDSFLKRIL 480 SAHTCLQVFF EQVGIAANLQ NRPRVEMQSM HIKTCMPIEE HARSILTPYA FNVLQHEIVL 540 SMEYATTEMA NGSYLVRHYK KMDGEYLVIW IPDGEQIHCS CKEFEHSGML CRHSLRVLVV 600 KNYFELPEKY CLHRWRLESS LVPMDDQHAQ SSSDECTQAF HSLAATLLTE SLISKERFNY 660 VHRELTGLLE HVRNMPVIDE FALNIAANNV SES

Sequence ? help Back to Top

Protein Sequence Length: 693 aa Download sequence

MSMKPSNNIW IRRQQCPCGD WKCYIKYEGD DQSSVSSQLV KSETTASSSS SSEAVFTPYV  60
GQIFKSDDDA FEYYSNFARK NGFSIRKARS TESQNLGVYR RDFVCYRSGF NQPRKKANVE  120
HPRDRKSVRC GCDAKLYLSK EIIDNVTQWY VSQFSNVHNH ELLEDDQVRL LPAYRKIQEA  180
DQERILLLSK AGFPVNRIVK VLELEKGVQP GQLPFIEKDV RNFVRTCKKT VQENDALLSE  240
KRENDMMELV DACKAMVERD PDFLYDCTTD ENGKVENIAW TFGDSVRAYT VFGDVVTFDT  300
TYRSITYGLH LGVWFGIDSH GKAIFFGSVL LQEENSHSFA WALQTFVRFM RGRRPQTILT  360
DIDSGLRDAI ARELPNTKHV ISISHILSKL SSWFSLPLGS QYPDFKADFD MLCHLESVED  420
FEHQWNLLVA RFGLVPDKHI ALLFSYRASW PLSYIRSYFL AHMLTAEFSQ SLDSFLKRIL  480
SAHTCLQVFF EQVGIAANLQ NRPRVEMQSM HIKTCMPIEE HARSILTPYA FNVLQHEIVL  540
SMEYATTEMA NGSYLVRHYK KMDGEYLVIW IPDGEQIHCS CKEFEHSGML CRHSLRVLVV  600
KNYFELPEKY CLHRWRLESS LVPMDDQHAQ SSSDECTQAF HSLAATLLTE SLISKERFNY  660
VHRELTGLLE HVRNMPVIDE FALNIAANNV SES

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28530.1	0.0	FAR1 family protein