PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023874108.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

MYB

Protein Properties

Length: 256aa MW: 29179.8 Da PI: 7.0919

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023874108.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.3	3.1e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT++Ed++l ++v+ +G g+W + +++ g++R++k+c++rw++yl XP_023874108.1 14 KGAWTAQEDKILTEYVRIHGEGQWGKLPKRAGLKRCGKSCRLRWLNYL 61 79********************************************97 PP
2	Myb_DNA-binding	53.1	7.3e-17	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ +++E+el+++++k+lG++ W++Ia +++ gRt++++k++w++ XP_023874108.1 67 RGNISPDEEELIIRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNSN 111 7899****************.*****.*********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 256 aa Download sequence
MGRSPCCSKE GLNKGAWTAQ EDKILTEYVR IHGEGQWGKL PKRAGLKRCG KSCRLRWLNY 60 LRPDIKRGNI SPDEEELIIR LHKLLGNRWS LIAGRLPGRT DNEIKNYWNS NLARKVHDNK 120 SATPTPSGHS TEDKSKINLQ VVRTNDAINK KNYHFDTKDS WLSEDCDHTC NNKSLEFDMY 180 HGLSSFANGS ENIQSSDFMM DFNMGELCFS DLLISSYLPD SCVFECSNGY DNGLSPSLEK 240 CSIFSSEMLC DWTFIQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G35550.1	7e-62	MYB family protein