PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023874110.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

FAR1

Protein Properties

Length: 972aa MW: 111102 Da PI: 7.5121

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023874110.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	71.4	2e-22	91	175	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 Yn+YA ++GFsvrk+k ++ ++ + +r++vCskeg+++++++ ++++ ++ +trtgC+a+++ + + +g+w+vt+++ HnHela XP_023874110.1 91 LYNDYAIRIGFSVRKEKIRYA--KNFVRQRDYVCSKEGFPRDSDNL-DDKKFKKLQTRTGCEASIRFTVT-NGEWKVTHFNPTHNHELA 175 7**************9998..5668***********9998.99999*************9.**************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 972 aa Download sequence
LEAKIKLIST LSADIVDISQ LIGLGNGLRL EILLALVSLF SPMTEVVAEI QCSPPQLTMA 60 DQDIRVNEEG VEDIETLLGM VVHSEDEAYK LYNDYAIRIG FSVRKEKIRY AKNFVRQRDY 120 VCSKEGFPRD SDNLDDKKFK KLQTRTGCEA SIRFTVTNGE WKVTHFNPTH NHELAKPEER 180 PFLRSNRKIT DAQLGVIKTF KEAGIRTISA YSYLVEEAGG FENVGFIKRD CYNVVNKQKL 240 INVEAGDAQS LVNHFKQKQA EDPMFFYAIQ VDQENRMTNF FWRDGRSRID YNSFGDVICF 300 DTTYRTNKYN MICAPFVGVN HHWKNVLFGC AFLLDETTVS FTWLFETFLE SMGNQKPKTI 360 FTDQCQAMKN AIRVVFPDTC HRLCLWHISK NAAENLPRHY GIPEFKSRFN KILYNCETES 420 EFESSWDALL KDYNLVGNKW LNTLYENRER WCSVFSHNIF SARMKASSRS ESVNNVFQHM 480 ACKTMRLTEF VHEYEKASKN MRVEELEEDF RCKQGTSSQI VKNCGLLEHA LSIYTRTFFK 540 RFELEIASTL GVTHQDVYSD GESFTYEVIE GGGHRVRVVQ FNSSNNVVTC SCKMFETLGL 600 LCRHALRILI VKNVTELPIQ YILKRWTKDA KKDSVLCDHV KPANANDELS VTSRRNELMR 660 SVYEIFTKSA ATTRHTEMCQ RKVREMIELV ENDMEQLNAA RDGDEKENRI VADNVFDDVE 720 KTDCSLNSLP ILEPPCVRPK GVTNARLKSN LEKRKRKPLK DVTRSKQLST RGLPTSSSHA 780 PKGLCQPKHP SSVPMDESYN NQVFLPPAMP TTISPSHFQH PNQNPFSYWS SASPNFSFTS 840 MLQSNDFLNH LSQPQPNTFI SNPATHESAR IPDAQTPYGF DHAILAYGFD YAPSIGDYKL 900 VKAVNAPLVV VFSLKTSAWK LVEGFHYKKP TEVWKGPLPC GTHLNGALHW VFKICGGGEC 960 VIAAFDLETD TF

Sequence ? help Back to Top

Protein Sequence Length: 972 aa Download sequence

LEAKIKLIST LSADIVDISQ LIGLGNGLRL EILLALVSLF SPMTEVVAEI QCSPPQLTMA  60
DQDIRVNEEG VEDIETLLGM VVHSEDEAYK LYNDYAIRIG FSVRKEKIRY AKNFVRQRDY  120
VCSKEGFPRD SDNLDDKKFK KLQTRTGCEA SIRFTVTNGE WKVTHFNPTH NHELAKPEER  180
PFLRSNRKIT DAQLGVIKTF KEAGIRTISA YSYLVEEAGG FENVGFIKRD CYNVVNKQKL  240
INVEAGDAQS LVNHFKQKQA EDPMFFYAIQ VDQENRMTNF FWRDGRSRID YNSFGDVICF  300
DTTYRTNKYN MICAPFVGVN HHWKNVLFGC AFLLDETTVS FTWLFETFLE SMGNQKPKTI  360
FTDQCQAMKN AIRVVFPDTC HRLCLWHISK NAAENLPRHY GIPEFKSRFN KILYNCETES  420
EFESSWDALL KDYNLVGNKW LNTLYENRER WCSVFSHNIF SARMKASSRS ESVNNVFQHM  480
ACKTMRLTEF VHEYEKASKN MRVEELEEDF RCKQGTSSQI VKNCGLLEHA LSIYTRTFFK  540
RFELEIASTL GVTHQDVYSD GESFTYEVIE GGGHRVRVVQ FNSSNNVVTC SCKMFETLGL  600
LCRHALRILI VKNVTELPIQ YILKRWTKDA KKDSVLCDHV KPANANDELS VTSRRNELMR  660
SVYEIFTKSA ATTRHTEMCQ RKVREMIELV ENDMEQLNAA RDGDEKENRI VADNVFDDVE  720
KTDCSLNSLP ILEPPCVRPK GVTNARLKSN LEKRKRKPLK DVTRSKQLST RGLPTSSSHA  780
PKGLCQPKHP SSVPMDESYN NQVFLPPAMP TTISPSHFQH PNQNPFSYWS SASPNFSFTS  840
MLQSNDFLNH LSQPQPNTFI SNPATHESAR IPDAQTPYGF DHAILAYGFD YAPSIGDYKL  900
VKAVNAPLVV VFSLKTSAWK LVEGFHYKKP TEVWKGPLPC GTHLNGALHW VFKICGGGEC  960
VIAAFDLETD TF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-124	FAR1 family protein