PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023874260.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family NF-YB
Protein Properties Length: 196aa    MW: 21393.7 Da    PI: 6.8861
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023874260.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB183.81.4e-5719114297
           NF-YB   2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 
                     reqdrflPianvsrimkk+lPanakisk+aketvqecvsefisf+t+easdkcqrekrktingddllwa++tlGfe+yveplk+yl+k+re+ege
  XP_023874260.1  19 REQDRFLPIANVSRIMKKALPANAKISKEAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKIYLQKFREMEGE 113
                     89********************************************************************************************9 PP

           NF-YB  97 k 97 
                     +
  XP_023874260.1 114 R 114
                     7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    
MADSDNDSGG QNNTNLSPRE QDRFLPIANV SRIMKKALPA NAKISKEAKE TVQECVSEFI  60
SFITGEASDK CQREKRKTIN GDDLLWAMTT LGFEEYVEPL KIYLQKFREM EGERSTAAMG  120
GRLGDSRDGI GDGSTTVVGN SGNSGGGILY GGVQSTMMMM GHNHHQQQHN YHQNNYHQGH  180
MYGSGSASGA SSGRPR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14540.13e-75NF-YB family protein