PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023874307.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family B3
Protein Properties Length: 189aa    MW: 21529.8 Da    PI: 6.235
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023874307.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B331.33.6e-101411805897
                     EEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
              B3  58 ryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                     ++ + kGW +F k+n+L+egD++vF++++++   l v +f
  XP_023874307.1 141 AMRFVKGWVGFSKDNNLEEGDVCVFEVIEKKPVVLSVLIF 180
                     456789********************99877777777776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    
MVDTSPPKLM HKLFRDALCI HVSMDGYLWS RFNSAELSTV ATLIASYGVF RYEGNSSFRV  60
LIFDKTITGI QYPPSKNCKL EDHHVEIIDL NEDDTNISPS DDLPTKHEYV PAKFSTKYII  120
RKQVVTLQCL VLLPPIKTYS AMRFVKGWVG FSKDNNLEEG DVCVFEVIEK KPVVLSVLIF  180
QVVDHQSLD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49480.14e-10B3 family protein