PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023874398.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

Protein Properties

Length: 227aa MW: 25886.7 Da PI: 9.0169

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023874398.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	56.6	4.6e-18	19	101	9	99
HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 9 dvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 + ++ +++p kf+++ ++ + + +l+ +sg++W vkl +k+ ++++l++GW++F +++ L +++ ++F+++g+ +f +v++f k XP_023874398.1 19 H--TTESMRIPPKFVKHLPIE--LPDQAILKGPSGEKWHVKL--CKTEDGIYLKDGWQRFFQDHSLGDNEWLLFRYNGDLCF--NVHIFGK 101 3..34459*****555433..6678***********..********************************9999..9999876 PP

Sequence ? help Back to Top
Protein Sequence Length: 227 aa Download sequence
MDEFLDNRPS FFKIIFEGHT TESMRIPPKF VKHLPIELPD QAILKGPSGE KWHVKLCKTE 60 DGIYLKDGWQ RFFQDHSLGD NEWLLFRYNG DLCFNVHIFG KNGCERVDAS STKANHETAS 120 SSGKRPRGRP RKTPHGLVPL QESKPCKVIL GQQCNSIETN QSKICKVADS FTSDFPYFKC 180 CMNKSSVVEF LQGCHLCRQS PLSLLGITFL KEIRRSSYGT QKINLGR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	124	132	KRPRGRPRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G06220.1	1e-19	B3 family protein