PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023874412.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

Protein Properties

Length: 196aa MW: 23047.1 Da PI: 6.7826

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023874412.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	55.3	1.2e-17	16	104	1	97
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 ffkv++p++ ++ r+++p f+++ + + +k+ +l++ + + W vk+ k s+++++ +GW+eFvk+n ++ gDf+vF+++g++ f +k XP_023874412.1 16 FFKVFLPEYCSE--RMRIPDAFVSQLDRS--VPKKAILRSGNRKIWHVKV--GKISDGVFFLNGWQEFVKDNLIELGDFLVFQYNGHDVF--GFK 102 899997777776..58*****988655..5668************..99999999*********************998777..666 PP EE CS B3 96 vf 97 +f XP_023874412.1 103 IF 104 66 PP

Sequence ? help Back to Top
Protein Sequence Length: 196 aa Download sequence
MVKNMSSTTT KRCTRFFKVF LPEYCSERMR IPDAFVSQLD RSVPKKAILR SGNRKIWHVK 60 VGKISDGVFF LNGWQEFVKD NLIELGDFLV FQYNGHDVFG FKIFGNSGCE KEEIETHVSI 120 NNGIEYLKEE EEEAEETEVE ENDSDSDDDE DYEDEVRNKK KKEKNIRKKR PWTKYCDRGQ 180 KKIVWKISRG LGKLVL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	157	163	RNKKKKE
2	157	169	RNKKKKEKNIRKK
3	159	186	KKKKEKNIRKKRPWTKYCDRGQKKIVWK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66980.1	4e-23	B3 family protein