PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023874413.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

CAMTA

Protein Properties

Length: 1026aa MW: 115113 Da PI: 8.6044

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023874413.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	177.2	2.1e-55	20	136	3	118
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqr 96 +e ++rwl+++ei++iL n+++++l ++++ rp+ gsl+L++rk++ryfrkDGy w+kkkdgktv+E+hekLK ++v+vl+cyYah+een++fqr XP_023874413.1 20 TEaQHRWLRPNEICEILRNHQRFQLRSDPPVRPQAGSLFLFDRKVIRYFRKDGYRWRKKKDGKTVKEAHEKLKANSVDVLHCYYAHGEENENFQR 114 4449***************************************************************************************** PP CG-1 97 rcywlLeeelekivlvhylevk 118 r+yw+L+ le+ivlvhy+evk XP_023874413.1 115 RSYWMLDACLEHIVLVHYREVK 136 *****************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 1026 aa Download sequence
MAESKRYVPN QPLDLDRIVT EAQHRWLRPN EICEILRNHQ RFQLRSDPPV RPQAGSLFLF 60 DRKVIRYFRK DGYRWRKKKD GKTVKEAHEK LKANSVDVLH CYYAHGEENE NFQRRSYWML 120 DACLEHIVLV HYREVKEGYK SGISRLMADP GSQAGSTQSC SVPCPAQANS PASTVQTSYP 180 SSPNRFDRNG RRLSSEFEDV DSGRDPRASL LVQPIFGSTS HSTSMLAHEV AGFPEITRNS 240 PDIWFSGSKY HGSESSNWAE INSLNVTDGV HGPKFFKHPT GADFITRRLT DARLDADSSV 300 QDVVTCGNRL ITDKDNQTLI AASQGVVQVP QERGSNLVRP QVQNCSDPHV VVTSTIHVEK 360 KSEDGGKDNN ETVGLKKLDS FGRWMDKEIG VDCDDSLMGS DSGNYWNTNT LDAENDEKEV 420 SSLSHHMQLE INSLGPSLSQ QQVFTIHDFA PDWTYSGDTT EDTTKVLIVG NFLVSKELSS 480 KIKWGCMFGE IEVSAEVLSD TVIRCHTPKH APGRVPFYVT CSNRLACSEV REFEYREKPS 540 GNVFPMAIKN APVDEVRIQT RLAKLLNLAQ VRKWLDCSIQ DCDKCKLKST IYSMRCDSGK 600 DWGRVDETSL AFNSDHMHPR DRLIQSLFKD RLYEWLICKV HEGGRGTHLL DNEGQGVIHL 660 AASLGYEWAM RPIVAVGVSP NFRDAHGRTG LHWASYFGRE ETVITLLRLG AAPGAVDDPT 720 STSPGGKTAA DLASSRGHKG IAGYLAEADL TTHLSSLTFN ENVMDSVAAT IAAEKAIETA 780 AQIVPSDMLA NENLSLKGSL AAVRKSAHAA ALIQAEFRLR SFNHRQLTKS NNDIPEASSL 840 DLVALGSLTK VRKFNNYEDY LHTAAAIKIQ QRYRGWKGRK EFLKIRNRIV KIQAHVRGHQ 900 VRKQYKKVVW SVSIVEKAIL RWRRKRSGLR GFRVEKAKIE KTDEYEFLRI GRKQKYAGVE 960 KALARVRSMV HYPEARDQYM RLATKFENLK MGDGGSGAIL QGEISQKGST VEDLAVHSEE 1020 LAFTAD

Sequence ? help Back to Top

Protein Sequence Length: 1026 aa Download sequence

MAESKRYVPN QPLDLDRIVT EAQHRWLRPN EICEILRNHQ RFQLRSDPPV RPQAGSLFLF  60
DRKVIRYFRK DGYRWRKKKD GKTVKEAHEK LKANSVDVLH CYYAHGEENE NFQRRSYWML  120
DACLEHIVLV HYREVKEGYK SGISRLMADP GSQAGSTQSC SVPCPAQANS PASTVQTSYP  180
SSPNRFDRNG RRLSSEFEDV DSGRDPRASL LVQPIFGSTS HSTSMLAHEV AGFPEITRNS  240
PDIWFSGSKY HGSESSNWAE INSLNVTDGV HGPKFFKHPT GADFITRRLT DARLDADSSV  300
QDVVTCGNRL ITDKDNQTLI AASQGVVQVP QERGSNLVRP QVQNCSDPHV VVTSTIHVEK  360
KSEDGGKDNN ETVGLKKLDS FGRWMDKEIG VDCDDSLMGS DSGNYWNTNT LDAENDEKEV  420
SSLSHHMQLE INSLGPSLSQ QQVFTIHDFA PDWTYSGDTT EDTTKVLIVG NFLVSKELSS  480
KIKWGCMFGE IEVSAEVLSD TVIRCHTPKH APGRVPFYVT CSNRLACSEV REFEYREKPS  540
GNVFPMAIKN APVDEVRIQT RLAKLLNLAQ VRKWLDCSIQ DCDKCKLKST IYSMRCDSGK  600
DWGRVDETSL AFNSDHMHPR DRLIQSLFKD RLYEWLICKV HEGGRGTHLL DNEGQGVIHL  660
AASLGYEWAM RPIVAVGVSP NFRDAHGRTG LHWASYFGRE ETVITLLRLG AAPGAVDDPT  720
STSPGGKTAA DLASSRGHKG IAGYLAEADL TTHLSSLTFN ENVMDSVAAT IAAEKAIETA  780
AQIVPSDMLA NENLSLKGSL AAVRKSAHAA ALIQAEFRLR SFNHRQLTKS NNDIPEASSL  840
DLVALGSLTK VRKFNNYEDY LHTAAAIKIQ QRYRGWKGRK EFLKIRNRIV KIQAHVRGHQ  900
VRKQYKKVVW SVSIVEKAIL RWRRKRSGLR GFRVEKAKIE KTDEYEFLRI GRKQKYAGVE  960
KALARVRSMV HYPEARDQYM RLATKFENLK MGDGGSGAIL QGEISQKGST VEDLAVHSEE  1020
LAFTAD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22300.2	0.0	CAMTA family protein