PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023874547.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

Protein Properties

Length: 172aa MW: 19615.9 Da PI: 10.1077

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023874547.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	30.6	6e-10	58	154	2	80
EEE-..-HHHHT.T-EE--HHH.HTT...............---..--SEEEEEETTS-EEEEEE..EEETTE..EEE-TTHHHHHHHHT--TT- CS B3 2 fkvltpsdvlks.grlvlpkkfaeeh...............ggkkeesktltledesgrsWevkliyrkksgr..yvltkGWkeFvkangLkegD 78 +k+ +psd+ + +rl++pk +++ +g++ +++++ l ++s ++ ++ l+ +k++++ y+l++ W++ + n+Lk+gD XP_023874547.1 58 QKEQSPSDMKDQfARLSIPKGQMSADflsqeeqpilqqkeeDGVHYKGMEVLLIQPSLEECTISLKKWKNGSStcYMLSSPWNKVATNNDLKVGD 152 577789999988899******999999888888866666556669**************8888877789****************** PP EE CS B3 79 fv 80 ++ XP_023874547.1 153 II 154 97 PP

Sequence ? help Back to Top
Protein Sequence Length: 172 aa Download sequence
MIKTHQEKLL PKRNPLSKSK NPRVIKHAGT NPPPYMPIEF ENIIIKAKKG FDIKLAIQKE 60 QSPSDMKDQF ARLSIPKGQM SADFLSQEEQ PILQQKEEDG VHYKGMEVLL IQPSLEECTI 120 SLKKWKNGSS TCYMLSSPWN KVATNNDLKV GDIIQIWTLR VNHGPRLALI KL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G05930.1	1e-10	B3 family protein