PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023874687.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

FAR1

Protein Properties

Length: 470aa MW: 54702 Da PI: 6.3556

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023874687.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	75.2	1.3e-23	42	130	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 +f+ +Y++++GF+vrk++ +ksk++g+it+r fvC k+g r ek++ + r++ trt+C kl v++ + gk++vt++ +eHnH+l XP_023874687.1 42 EFWLKYGRQMGFDVRKHYINKSKKDGKITSRGFVCAKQGIRGLEKED-MIRTRNQDDTRTNCPVKLYVSLVReIGKYKVTDFIEEHNHTL 130 69****************************************999.99999*************9989************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 470 aa Download sequence
MMREFSQNMD ANEDLSPTVM DANEDLSPRV GMEFDTLEDA WEFWLKYGRQ MGFDVRKHYI 60 NKSKKDGKIT SRGFVCAKQG IRGLEKEDMI RTRNQDDTRT NCPVKLYVSL VREIGKYKVT 120 DFIEEHNHTL HLSETVHMMR SQRKISEVHA GLIELASSSG IKPKAAHELM SREAGGRANL 180 GFTELDQYNY LRTRRQKNLI YGQAACLLGY FQEQLTTNPS FQYAVQLDNV EQITNIFWAD 240 ARMIIDYSNF GDVVTFDTTY GTNKELRPLG VFIGFNHHRG LTVFGAALLY DETAESFKWL 300 FERFLVAHVG KRPKTIFTDQ DPAMAKALSE VMPNTYHGLC TWHIMQNGIK HLGNLMKDGS 360 SFLQVFKTCM FEFNDEIEFE KTWEDMIDTY AVHDRSWLDT IYKLKGKWAK CYMKNEFTLG 420 IRSTQLSESL NGDLKDYLRS DLDVAEFFEH FDRVIEQKRE RELQAEFNAR

Sequence ? help Back to Top

Protein Sequence Length: 470 aa Download sequence

MMREFSQNMD ANEDLSPTVM DANEDLSPRV GMEFDTLEDA WEFWLKYGRQ MGFDVRKHYI  60
NKSKKDGKIT SRGFVCAKQG IRGLEKEDMI RTRNQDDTRT NCPVKLYVSL VREIGKYKVT  120
DFIEEHNHTL HLSETVHMMR SQRKISEVHA GLIELASSSG IKPKAAHELM SREAGGRANL  180
GFTELDQYNY LRTRRQKNLI YGQAACLLGY FQEQLTTNPS FQYAVQLDNV EQITNIFWAD  240
ARMIIDYSNF GDVVTFDTTY GTNKELRPLG VFIGFNHHRG LTVFGAALLY DETAESFKWL  300
FERFLVAHVG KRPKTIFTDQ DPAMAKALSE VMPNTYHGLC TWHIMQNGIK HLGNLMKDGS  360
SFLQVFKTCM FEFNDEIEFE KTWEDMIDTY AVHDRSWLDT IYKLKGKWAK CYMKNEFTLG  420
IRSTQLSESL NGDLKDYLRS DLDVAEFFEH FDRVIEQKRE RELQAEFNAR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	3e-95	FAR1 family protein