PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023874740.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family ERF
Protein Properties Length: 235aa    MW: 26294 Da    PI: 6.0934
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023874740.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.61.2e-1652100355
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     + GVr+++ +grWvAeI+d s   ++ r +lg++++aeeAa a++ a++ l+g
  XP_023874740.1  52 FLGVRQRP-SGRWVAEIKDSS---QKLRLWLGTYDSAEEAALAYDSAARLLRG 100
                     67******.7*********42...36***********************9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    
MDSLESSGIP FEPQNLCKNY TQTPLEGDKV HENEEERSMK FPKRVNSNGR RFLGVRQRPS  60
GRWVAEIKDS SQKLRLWLGT YDSAEEAALA YDSAARLLRG RNAKTNFPCH GNMNSHEESS  120
SLLGKNPRLF QLLQHAITKN HARSSSLFPD EIIPWNDHIT GDKVDSNHFD TLVEETIVCS  180
SNSESAGSCG FDHDRNMLSQ LSFGSSKVYS SVFVAPSFSS SLCQVGEDEK NGQEF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.13e-15ERF family protein