PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023875024.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family C2H2
Protein Properties Length: 195aa    MW: 22051.1 Da    PI: 9.2068
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023875024.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2157.1e-053860123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    ++C+ C++ F++   L  H+++H
  XP_023875024.1 38 FTCNFCKRQFRSAQALGGHMNVH 60
                    89*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    
MEKPYLIKGE GKGKWDSNNF SFEEDHSCGV SWPAKQVFTC NFCKRQFRSA QALGGHMNVH  60
RKDRARLRLL PSSSSDSHNP KPNFTSSPSS SSSKFLPYTH HPLPFLSLPS SSSIDDEKKL  120
ELPHLDPLNP QGRNNMNKKR IIGGVLGFEE LRGTFAQKDE LKVLKKEDTI KLGLEIGLLK  180
DPQEDLDLEL RLGFF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23130.12e-24C2H2 family protein