PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023875215.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family C2H2
Protein Properties Length: 292aa    MW: 33737.6 Da    PI: 7.2779
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023875215.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2120.00062150174123
                     EEETTTTEEESSHHHHHHHHHH..T CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirt..H 23 
                     + C  C+k ++  ++++ H+++  H
  XP_023875215.1 150 FYCDLCNKQYKLAMEFEAHLSSydH 174
                     78*****************987555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    
MSARDKQHHQ KEQAYRDSLI EDLADDFRLP INHRPTENVD LDNVEQASLD TQLTSSNIGF  60
RLLQKMGWKG KGLGKDEQGI IEPIRSGIRD PKLGVGKQEQ DDFFTAEENI QRRKLDVEVE  120
ETEEHAKKRE VLAEREQKIQ IEVKEIRKVF YCDLCNKQYK LAMEFEAHLS SYDHNHRKRF  180
KEMREMHGTS SRDDRQKREQ QRQEREMAKF AQMENARKQQ QLQQQQEDSG SAPVPTEVKG  240
ATALTDQEPR KVLKFGFSSK GGTSKNSFGS AAKKKPKEAV ASVFGNDSDE EK