PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023875264.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

NAC

Protein Properties

Length: 254aa MW: 28907.8 Da PI: 9.2825

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023875264.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	159.4	1.5e-49	15	140	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdL.pkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 lppGfrF+Ptdeelv +yLk kv + +l++ +vi+e++++k++Pw+L p + e+e yfFs+++ ky++g+r++r+t+sgyWk+tg+dk+++s XP_023875264.1 15 LPPGFRFQPTDEELVFQYLKCKVFSCPLPA-SVIPEINVCKFDPWELlPG---ELEQERYFFSQKEAKYPNGNRTKRTTNSGYWKTTGTDKKIVS 105 79**************************.99**********343...346799*******************************9 PP NAM 95 k.kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++ vg+kktLvfykg+ p+g++tdW+mheyrl XP_023875264.1 106 PrRNHIVGMKKTLVFYKGKPPHGSRTDWIMHEYRL 140 867788*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 254 aa Download sequence
MDKLSFTQEG VTRILPPGFR FQPTDEELVF QYLKCKVFSC PLPASVIPEI NVCKFDPWEL 60 LPGELEQERY FFSQKEAKYP NGNRTKRTTN SGYWKTTGTD KKIVSPRRNH IVGMKKTLVF 120 YKGKPPHGSR TDWIMHEYRL VYAETTGCTF PQIHDSIQNF LVQMENWVLC RIYLKKGSVM 180 KNNDMLINQT SSNNKIENVG VAQPRFFNFM LGYKSSLPLA SSTSSSSSSS SSTTTEVSSS 240 GADHEESTSA RTTY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G13180.1	8e-78	NAC family protein