PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023875345.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family bHLH
Protein Properties Length: 164aa    MW: 18002.6 Da    PI: 8.2106
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023875345.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH12.30.000314794254
                    HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                    r ++    + R +++ +++  L++l+ +      +K + a++L  A+eYI+ L
  XP_023875345.1 47 RHKADLSAKERKEKLGERIVALQQLVSPF-----GKTDTASVLCDAMEYINFL 94
                    6666667789999999**********998.....8***************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 164 aa     Download sequence    
MIVSSSFCNA DSQFSGEEEI EVGKMMEHKR SPCSVEQSSL TSLASKRHKA DLSAKERKEK  60
LGERIVALQQ LVSPFGKTDT ASVLCDAMEY INFLHDQVKV LSAPYLQSNP SKMQELGPYS  120
LRSRGLCLVP VSCTAGVARS NGADIWAPIK TTSPKFEKAI SQFQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05710.35e-61bHLH family protein