PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023875655.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family GRAS
Protein Properties Length: 403aa    MW: 45019.1 Da    PI: 7.9246
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023875655.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS334.71.7e-102414022374
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 
                      ++L+++Ae++ +g+++ aq +Larl+++ sp g+p++R+a+yf+eAL+  l+   ++ + + pp++ ++ +++ ++ a+k+fsevsP+++f ++
  XP_023875655.1  41 LDQLYKAAECIGTGNFSHAQGILARLNHQLSPVGKPLHRAAFYFKEALQLLLLM--NNPVTSPPPRSPTPFDVIFKMGAYKVFSEVSPLIQFVNF 133
                     679*************************************************98..4444456777777899*********************** PP

            GRAS  97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledl.. 189
                     t+Nqa+lea++  +r+Hi+Dfdi+ G+QW++++q+L  R++g+psl+iT+++sp++++  el  ++e+L++fA+e+g++fe +v+  + l++   
  XP_023875655.1 134 TCNQALLEALSDVDRIHIVDFDIGFGAQWASFMQELPVRNRGAPSLKITAFASPSTHHPVELVLMRENLTQFANEIGISFELEVVNFDCLDQTsy 228
                     ************************************************************************************97777776633 PP

            GRAS 190 eleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerik 284
                     +l  Lr  ++Ea+aVn+ +   +  +++++l+s    +L++vk+lsPk++v  ++ +d+++ +F +++l+al+ y  l++sl+a    +s++ +k
  XP_023875655.1 229 SLPILRAAENEAVAVNFPI--WSSSNQPAALPS----ILRFVKQLSPKIMVSLDRGCDRTDLPFPQHVLQALQSYINLLESLDAV-NVTSDAVNK 316
                     556799999********99..555567888888....*********************************************665.579****** PP

            GRAS 285 vErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     +Er+ll+++i++ v  + +       +l  W+  + +aGF+pv +s+++++qa++++++++++g++ve+++ slvl+W++r+L+s+SaWr
  XP_023875655.1 317 IERFLLQPKIESTVLGRLRG----PDKLPLWKTLFASAGFSPVIFSNFTETQAECVVKRTPVRGFHVEKRQSSLVLCWQRRELISASAWR 402
                     ***************98888....99***************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 403 aa     Download sequence    
MVVLNFCHNV SEILSPAACI EIACLKKSLK SQQQQQQLAL LDQLYKAAEC IGTGNFSHAQ  60
GILARLNHQL SPVGKPLHRA AFYFKEALQL LLLMNNPVTS PPPRSPTPFD VIFKMGAYKV  120
FSEVSPLIQF VNFTCNQALL EALSDVDRIH IVDFDIGFGA QWASFMQELP VRNRGAPSLK  180
ITAFASPSTH HPVELVLMRE NLTQFANEIG ISFELEVVNF DCLDQTSYSL PILRAAENEA  240
VAVNFPIWSS SNQPAALPSI LRFVKQLSPK IMVSLDRGCD RTDLPFPQHV LQALQSYINL  300
LESLDAVNVT SDAVNKIERF LLQPKIESTV LGRLRGPDKL PLWKTLFASA GFSPVIFSNF  360
TETQAECVVK RTPVRGFHVE KRQSSLVLCW QRRELISASA WRC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00150.11e-127GRAS family protein