PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023875661.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family GRAS
Protein Properties Length: 746aa    MW: 82357.2 Da    PI: 6.6171
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023875661.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS3321.1e-1013847452374
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 
                      ++L+++Ae++ +g+++ aq +Larl+++ sp g+p++R+a+yf+eAL+  l+   ++ + + pp++ ++ +++ ++ a+k+fsevsP+++f ++
  XP_023875661.1 384 LDQLYKAAECIGTGNFSHAQGILARLNHQLSPVGKPLHRAAFYFKEALQLLLLM--NNPVTSPPPRSPTPFDVIFKMGAYKVFSEVSPLIQFVNF 476
                     679*************************************************98..4444456777777899*********************** PP

            GRAS  97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledl.. 189
                     t+Nqa+lea++  +r+Hi+Dfdi+ G+QW++++q+L  R++g+psl+iT+++sp++++  el  ++e+L++fA+e+g++fe +v+  + l++   
  XP_023875661.1 477 TCNQALLEALSDVDRIHIVDFDIGFGAQWASFMQELPVRNRGAPSLKITAFASPSTHHPVELVLMRENLTQFANEIGISFELEVVNFDCLDQTsy 571
                     ************************************************************************************97777776633 PP

            GRAS 190 eleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerik 284
                     +l  Lr  ++Ea+aVn+ +   +  +++++l+s    +L++vk+lsPk++v  ++ +d+++ +F +++l+al+ y  l++sl+a    +s++ +k
  XP_023875661.1 572 SLPILRAAENEAVAVNFPI--WSSSNQPAALPS----ILRFVKQLSPKIMVSLDRGCDRTDLPFPQHVLQALQSYINLLESLDAV-NVTSDAVNK 659
                     556799999********99..555567888888....*********************************************665.579****** PP

            GRAS 285 vErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     +Er+ll+++i++ v  + +       +l  W+  + +aGF+pv +s+++++qa++++++++++g++ve+++ slvl+W++r+L+s+SaWr
  XP_023875661.1 660 IERFLLQPKIESTVLGRLRG----PDKLPLWKTLFASAGFSPVIFSNFTETQAECVVKRTPVRGFHVEKRQSSLVLCWQRRELISASAWR 745
                     ***************98888....99***************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 746 aa     Download sequence    
MKKHQKKKSE STPLESMRGM PFQLQGKGVF EIASFTPICS WNSNNKKEEL LDFANNNFNS  60
NNHNNTNNNN EPSSVLHMRR SPSPPTSAST LSSSFGGGGS TDNTAGGGGG VAATLPTDPS  120
PGPDPTRKDE WASELQPITS GLTGGGERCG LGGLEDWETM LSETAASPSQ DHSLLRLIAG  180
DVDDSSFGLK QLLQSGNNSN TNPLDLDGNA GLGIVDQGPG VFDPIIGGVT LPPGVIYQQQ  240
HQHQQFEVPD EKPQILNPQM LMNQQQQQSQ HPQSPNFFLP LPFAQQEQHL PQPQPKRQNS  300
GGLDPITQIP KPPFVDPGHE FLLRKHQQLQ PQHIGFSPGV QFVPQHLQQK PLMVPNQKMG  360
PGEELAQHHH QQQQQQQQQQ LALLDQLYKA AECIGTGNFS HAQGILARLN HQLSPVGKPL  420
HRAAFYFKEA LQLLLLMNNP VTSPPPRSPT PFDVIFKMGA YKVFSEVSPL IQFVNFTCNQ  480
ALLEALSDVD RIHIVDFDIG FGAQWASFMQ ELPVRNRGAP SLKITAFASP STHHPVELVL  540
MRENLTQFAN EIGISFELEV VNFDCLDQTS YSLPILRAAE NEAVAVNFPI WSSSNQPAAL  600
PSILRFVKQL SPKIMVSLDR GCDRTDLPFP QHVLQALQSY INLLESLDAV NVTSDAVNKI  660
ERFLLQPKIE STVLGRLRGP DKLPLWKTLF ASAGFSPVIF SNFTETQAEC VVKRTPVRGF  720
HVEKRQSSLV LCWQRRELIS ASAWRC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00150.11e-124GRAS family protein