PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023875741.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

FAR1

Protein Properties

Length: 508aa MW: 58659.8 Da PI: 8.6968

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023875741.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	74.3	2.6e-23	130	218	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fY+eYA+++GFsvrk++ k+ + g+i++rtf Cskegkr +k++ e+++ +r +rtgC a+++ +++kdg +v +++++HnHe+ap XP_023875741.1 130 EFYKEYAHRIGFSVRKHSVKRG-NVGQIIRRTFSCSKEGKRVFDKRR-ENASYRRLISRTGCLAQMTCHLQKDGMLHVVSFHSQHNHEFAP 218 6************9998887.8888************9999.99999*********************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 508 aa Download sequence
MALKLIPTSR NPLGSDILEG RMSPSNNTFD QMMDTSQIIL LKDELNCCIA NQQEDTQVEP 60 THGSPNKSNT PSRYSKEIVE VPEIVLEDEF IGLIVDQQEE AKVVLTPRSP NKSNTPAVGM 120 KFDCDDSAYE FYKEYAHRIG FSVRKHSVKR GNVGQIIRRT FSCSKEGKRV FDKRRENASY 180 RRLISRTGCL AQMTCHLQKD GMLHVVSFHS QHNHEFAPSP MKHMLRSKRK FSLAQKAIAK 240 DAERFGISIK QTIELLSMQA GGRENLGFMD VDYKNQVHNE RRMALRKGDG PAMMEYFHKI 300 QLVDPSYFYS IQVDDDGQIM NIFWADARSI VSYGNFGDVI CFDTTYQTNI YDRPFAPFVG 360 VNHHKQSIIF GKQPRTIFTD QSATMAKAIA KNVAKNLHHV FYSSKQFAND FSDCLYEHED 420 EWLVSWDYML KEYGLTDNKW LCSIFDVKEK WAIVYGRHMF TADMKSTQRS ESINNVLKKY 480 LKPRHDFVLF SGHYSRVLAN KRYQELQA

Sequence ? help Back to Top

Protein Sequence Length: 508 aa Download sequence

MALKLIPTSR NPLGSDILEG RMSPSNNTFD QMMDTSQIIL LKDELNCCIA NQQEDTQVEP  60
THGSPNKSNT PSRYSKEIVE VPEIVLEDEF IGLIVDQQEE AKVVLTPRSP NKSNTPAVGM  120
KFDCDDSAYE FYKEYAHRIG FSVRKHSVKR GNVGQIIRRT FSCSKEGKRV FDKRRENASY  180
RRLISRTGCL AQMTCHLQKD GMLHVVSFHS QHNHEFAPSP MKHMLRSKRK FSLAQKAIAK  240
DAERFGISIK QTIELLSMQA GGRENLGFMD VDYKNQVHNE RRMALRKGDG PAMMEYFHKI  300
QLVDPSYFYS IQVDDDGQIM NIFWADARSI VSYGNFGDVI CFDTTYQTNI YDRPFAPFVG  360
VNHHKQSIIF GKQPRTIFTD QSATMAKAIA KNVAKNLHHV FYSSKQFAND FSDCLYEHED  420
EWLVSWDYML KEYGLTDNKW LCSIFDVKEK WAIVYGRHMF TADMKSTQRS ESINNVLKKY  480
LKPRHDFVLF SGHYSRVLAN KRYQELQA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	7e-72	FAR1 family protein