PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023875868.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

FAR1

Protein Properties

Length: 826aa MW: 94748.1 Da PI: 7.757

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023875868.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	70.3	4.4e-22	68	158	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrng..eitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fYn+YA+ vGFs+r+sk +k +++g + +r f+Cs+eg r ++k++ ++ + +r+etr+gC a++k++ ++++k++v k+++eH+H la XP_023875868.1 68 DFYNSYARVVGFSIRRSKGHKGDKDGsrKWLDRVFCCSCEGIRGNDKRD-DNVKCHRPETRCGCLAEMKISCRYSEKYRVVKFVSEHTHVLA 158 6**************9999866651167899*********999.99999********************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 826 aa Download sequence
MSDSNYHTKT DSQSVRKLNF EDEDSPLVIV EQPEPISIDS NDKIHANVEE EVTPKLGIEF 60 ETEQDAYDFY NSYARVVGFS IRRSKGHKGD KDGSRKWLDR VFCCSCEGIR GNDKRDDNVK 120 CHRPETRCGC LAEMKISCRY SEKYRVVKFV SEHTHVLASS HKRIFLRSQR SINPTQAVEV 180 ELADSSGITP RASVGLMARR VGGLDNLGFI PEDYNNYLRT RRTEEMKSGD TGGLLEYLQR 240 MQSEDLNFSY AIQVDVDDLI TNVFWADGRM KLDYEYFGDV VCFDTTYKKN KEGRLFALFV 300 GVNHHKQTII FGAALLYDET SETFMWLFDS FQKAMFGKKP QTILTDQDAA MAKALASQWP 360 ETHHRLCVWH MYQNAAKNLK EVFGRYSTFA ADFSSCVYDH DYEDDFLDAW DNILDKYDLK 420 NNSWLQRQFE LREKWALVYG RKTFCADMST TQRSESMNSQ IKRYITYNYD LLRFFRHFQR 480 LVDDRSFEEL RADFKATQSK PSLEYPVEIL KHAASVYTLA VFKLFNRELW LTWDCELHKE 540 AEVGSVVKYK VISPRKSRQH IVQFDSLAST VMCSCNKFEF VGILCAHALK VLSLQNCKRV 600 PNQYILKRWT KDARVGSTMK NYMHVGPHDQ NADVGSCYKV LLKLYSNLAA RAALTDETFR 660 ISLDAHENTL NKVEANLKNL SIEESTVGST HFKSKAQGAN DNVQPTNCEG NKIKGIKLKG 720 RQACVGTSRT RKGALEKATR KRKRQTKASS HIQQLTPEDS MVNLNTPGFT DMLNLTQEDS 780 MANLNTPGFT DMLNLTQEDS MANLNTPGFT DMLNLIQAQL PKVGNQ

Sequence ? help Back to Top

Protein Sequence Length: 826 aa Download sequence

MSDSNYHTKT DSQSVRKLNF EDEDSPLVIV EQPEPISIDS NDKIHANVEE EVTPKLGIEF  60
ETEQDAYDFY NSYARVVGFS IRRSKGHKGD KDGSRKWLDR VFCCSCEGIR GNDKRDDNVK  120
CHRPETRCGC LAEMKISCRY SEKYRVVKFV SEHTHVLASS HKRIFLRSQR SINPTQAVEV  180
ELADSSGITP RASVGLMARR VGGLDNLGFI PEDYNNYLRT RRTEEMKSGD TGGLLEYLQR  240
MQSEDLNFSY AIQVDVDDLI TNVFWADGRM KLDYEYFGDV VCFDTTYKKN KEGRLFALFV  300
GVNHHKQTII FGAALLYDET SETFMWLFDS FQKAMFGKKP QTILTDQDAA MAKALASQWP  360
ETHHRLCVWH MYQNAAKNLK EVFGRYSTFA ADFSSCVYDH DYEDDFLDAW DNILDKYDLK  420
NNSWLQRQFE LREKWALVYG RKTFCADMST TQRSESMNSQ IKRYITYNYD LLRFFRHFQR  480
LVDDRSFEEL RADFKATQSK PSLEYPVEIL KHAASVYTLA VFKLFNRELW LTWDCELHKE  540
AEVGSVVKYK VISPRKSRQH IVQFDSLAST VMCSCNKFEF VGILCAHALK VLSLQNCKRV  600
PNQYILKRWT KDARVGSTMK NYMHVGPHDQ NADVGSCYKV LLKLYSNLAA RAALTDETFR  660
ISLDAHENTL NKVEANLKNL SIEESTVGST HFKSKAQGAN DNVQPTNCEG NKIKGIKLKG  720
RQACVGTSRT RKGALEKATR KRKRQTKASS HIQQLTPEDS MVNLNTPGFT DMLNLTQEDS  780
MANLNTPGFT DMLNLTQEDS MANLNTPGFT DMLNLIQAQL PKVGNQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-128	FAR1 family protein